| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is plsC [H]
Identifier: 78221584
GI number: 78221584
Start: 406727
End: 407431
Strand: Direct
Name: plsC [H]
Synonym: Gmet_0363
Alternate gene names: 78221584
Gene position: 406727-407431 (Clockwise)
Preceding gene: 78221582
Following gene: 78221585
Centisome position: 10.17
GC content: 66.52
Gene sequence:
>705_bases ATGCTTAACGGTTTGATTTATCTGCTCTTTTTTGTGCCGCTCACCGCCTTTTTCAGCGTGCTTGCCATGCTCGGCGGACT CGTCGATTCCCGGGGGGGATTGGCCCACCGGTGCGCCCTTGCCTGGAGCCGCGCCGGCCTCATACTGGCCGGGGTCCGTC TGAGGGTGAGCGGCGCGGAGCAGGTGCCGGCAGGGGAACCGGTGATTTTCATGGGGAACCACCAGGGGAACTTCGATATC CTCGTCCTTTCCCGGGCCGTCCCGCGCCGGTTTTCGTGGCTGGCCAAGGAGGAGCTTTTCCGCATTCCGCTGTTCGGGTC CGCCATGCGGCGGGCCGGCTACATTCCCGTGGACCGGAGTGACGGCCGCAAGGCCCTGCGGAGCCTTGACGCCGCGGCAA AGAGGATCAGGGCCGGGGCCAGCGTCATCGTCTTCCCCGAGGGGACCCGGACCGTCGACGGTTCGCTCCTCCCCTTCAAG AAGGGGGGCTTCATCCTGGCGGAGCGGGCGGGAGTGCCGATCGTCCCCTTCACCATCAACGGCAGCATGCGGGTGAACCC CCGCAATACCTGCAACCTTGTCCGCGGCGCGGAGATCTCGGTCCGGTTCGGTGCGCCGATCCCCACCTCCGGCAGCAAAG CCCTCAAGGGGCAGCCCCTCATGGACCGGGTGCGGGACTCCATCCAGGCCGGGTTGGAACGTTAG
Upstream 100 bases:
>100_bases GCAGTGTATAGGAATTGGGGGGATTCTGGCAAGCTATATTTGGTTTGACGAAGGATGGAAAAAGTCGTAAGGTTAACCGG ATTTACACCCGGAGTCGTGA
Downstream 100 bases:
>100_bases GATGCAACTTCTTTCCCTCGCACTCATCGCCATAGGGGGCGCGGCCATGGCCTGGGGACTGCCGGCGGCCCACCGGTTGG CAAAACCGTGGGATGTTCTG
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLNGLIYLLFFVPLTAFFSVLAMLGGLVDSRGGLAHRCALAWSRAGLILAGVRLRVSGAEQVPAGEPVIFMGNHQGNFDI LVLSRAVPRRFSWLAKEELFRIPLFGSAMRRAGYIPVDRSDGRKALRSLDAAAKRIRAGASVIVFPEGTRTVDGSLLPFK KGGFILAERAGVPIVPFTINGSMRVNPRNTCNLVRGAEISVRFGAPIPTSGSKALKGQPLMDRVRDSIQAGLER
Sequences:
>Translated_234_residues MLNGLIYLLFFVPLTAFFSVLAMLGGLVDSRGGLAHRCALAWSRAGLILAGVRLRVSGAEQVPAGEPVIFMGNHQGNFDI LVLSRAVPRRFSWLAKEELFRIPLFGSAMRRAGYIPVDRSDGRKALRSLDAAAKRIRAGASVIVFPEGTRTVDGSLLPFK KGGFILAERAGVPIVPFTINGSMRVNPRNTCNLVRGAEISVRFGAPIPTSGSKALKGQPLMDRVRDSIQAGLER >Mature_234_residues MLNGLIYLLFFVPLTAFFSVLAMLGGLVDSRGGLAHRCALAWSRAGLILAGVRLRVSGAEQVPAGEPVIFMGNHQGNFDI LVLSRAVPRRFSWLAKEELFRIPLFGSAMRRAGYIPVDRSDGRKALRSLDAAAKRIRAGASVIVFPEGTRTVDGSLLPFK KGGFILAERAGVPIVPFTINGSMRVNPRNTCNLVRGAEISVRFGAPIPTSGSKALKGQPLMDRVRDSIQAGLER
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=181, Percent_Identity=35.9116022099448, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI15100175, Length=181, Percent_Identity=35.9116022099448, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI6041665, Length=181, Percent_Identity=30.3867403314917, Blast_Score=87, Evalue=9e-18, Organism=Escherichia coli, GI1789395, Length=115, Percent_Identity=34.7826086956522, Blast_Score=73, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17564032, Length=186, Percent_Identity=29.5698924731183, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17568319, Length=127, Percent_Identity=36.2204724409449, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320151, Length=220, Percent_Identity=32.2727272727273, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI24641614, Length=227, Percent_Identity=30.8370044052863, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24641612, Length=227, Percent_Identity=30.8370044052863, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281364648, Length=235, Percent_Identity=28.5106382978723, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582856, Length=235, Percent_Identity=28.5106382978723, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582854, Length=235, Percent_Identity=28.5106382978723, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 25255; Mature: 25255
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNGLIYLLFFVPLTAFFSVLAMLGGLVDSRGGLAHRCALAWSRAGLILAGVRLRVSGAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCC QVPAGEPVIFMGNHQGNFDILVLSRAVPRRFSWLAKEELFRIPLFGSAMRRAGYIPVDRS CCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCC DGRKALRSLDAAAKRIRAGASVIVFPEGTRTVDGSLLPFKKGGFILAERAGVPIVPFTIN CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEC GSMRVNPRNTCNLVRGAEISVRFGAPIPTSGSKALKGQPLMDRVRDSIQAGLER CEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNGLIYLLFFVPLTAFFSVLAMLGGLVDSRGGLAHRCALAWSRAGLILAGVRLRVSGAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCC QVPAGEPVIFMGNHQGNFDILVLSRAVPRRFSWLAKEELFRIPLFGSAMRRAGYIPVDRS CCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCC DGRKALRSLDAAAKRIRAGASVIVFPEGTRTVDGSLLPFKKGGFILAERAGVPIVPFTIN CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEC GSMRVNPRNTCNLVRGAEISVRFGAPIPTSGSKALKGQPLMDRVRDSIQAGLER CEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]