| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221559
Identifier: 78221559
GI number: 78221559
Start: 377293
End: 378195
Strand: Direct
Name: 78221559
Synonym: Gmet_0338
Alternate gene names: NA
Gene position: 377293-378195 (Clockwise)
Preceding gene: 78221558
Following gene: 78221560
Centisome position: 9.44
GC content: 56.81
Gene sequence:
>903_bases ATGTATTCCATGCAGGAAATCAAAGCGCATTACCTGTTCGGCGACGAGGATGCCGAAACGCTGAAGTCGCTCCTCTCCAT AGCCCAGGCAAACCGGGAGCTGATGATTGAGGACTTTTACGACTATCTCCTCGGCATTCCGGAAACGGCCGCGTTTCTCC AGGACGACACGGTCCTCCAGCGGCTCAAGCTGAGCCACGGCGGATGGTTCGTCAACCTCTTCCGGGGCGTTTACGACAAT CAGTACCTGCACGATCTCCAGCGCGTCGGTCATGTTCATGTCAAAATCGGGCTCAACGCCCATTTCGTGAACGCGGCCAT GCAGAAGGTGCGGCGTTTTGCGGTCGGCATGATCAGGGAGAACTTTCCCGACCGGGACGAGCGGCGGAAGAAAACAGAGG CGGTGGAAAAGATTCTCGATATCAACCTCGACATCATGACGGCCTCCTACATCGAGGAGGAACTGAAGAAGGTCTTCATT TCCAAACGGCTGGAATCGCTGCTGGTCAGGGCAACGGAGCGTTTCACCTACGGCCTCAACCTGGTCCTGGTGCTCGCCCT GGTCGGCGTGTCCCTTTCGGTCGTTGGTCTGTTTTTCTGGGAGATATTTCATGTCTTCAGGGGCTCCGTCGAGAAAGGGA TCCTGAGCGCCCTCGGTACGCTCCTCATCCTCTGGATGATGATCGAGCTCATGGACAACGAGATCAAGACCCTGAAAGGG GGGCGCTTCAATATCCAGGTGTTCATCGGCGTGGTCATCATCGCCATCATCCGGGAAATCCTGATTTCGACGCTCCGTCA CGATCCCCTGGAGACCCAGGTCTTCCTGGCCGGGACGCTGATGGTCCTGGGAGTCGTATACTACCTGGTCGCCCGAAGCC AGCAGATATCGCCCATACGCTGA
Upstream 100 bases:
>100_bases TCCGTTCTATTTCCTGAATTCATTCACAAGCCGTGTATAATGAAAAATATAGTAATCTCGGGAAACGTCAGGACTGCCTG CCGATGAACGGAGTGCCTCT
Downstream 100 bases:
>100_bases GTGGGGAGCGGGACTTATGCTACTCTTTGAAATACAATGACGTGAGGGTGAGCCATGGGGAGTGAAAAAGGAACTATTGA TCCCGCTGTGTACCGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYSMQEIKAHYLFGDEDAETLKSLLSIAQANRELMIEDFYDYLLGIPETAAFLQDDTVLQRLKLSHGGWFVNLFRGVYDN QYLHDLQRVGHVHVKIGLNAHFVNAAMQKVRRFAVGMIRENFPDRDERRKKTEAVEKILDINLDIMTASYIEEELKKVFI SKRLESLLVRATERFTYGLNLVLVLALVGVSLSVVGLFFWEIFHVFRGSVEKGILSALGTLLILWMMIELMDNEIKTLKG GRFNIQVFIGVVIIAIIREILISTLRHDPLETQVFLAGTLMVLGVVYYLVARSQQISPIR
Sequences:
>Translated_300_residues MYSMQEIKAHYLFGDEDAETLKSLLSIAQANRELMIEDFYDYLLGIPETAAFLQDDTVLQRLKLSHGGWFVNLFRGVYDN QYLHDLQRVGHVHVKIGLNAHFVNAAMQKVRRFAVGMIRENFPDRDERRKKTEAVEKILDINLDIMTASYIEEELKKVFI SKRLESLLVRATERFTYGLNLVLVLALVGVSLSVVGLFFWEIFHVFRGSVEKGILSALGTLLILWMMIELMDNEIKTLKG GRFNIQVFIGVVIIAIIREILISTLRHDPLETQVFLAGTLMVLGVVYYLVARSQQISPIR >Mature_300_residues MYSMQEIKAHYLFGDEDAETLKSLLSIAQANRELMIEDFYDYLLGIPETAAFLQDDTVLQRLKLSHGGWFVNLFRGVYDN QYLHDLQRVGHVHVKIGLNAHFVNAAMQKVRRFAVGMIRENFPDRDERRKKTEAVEKILDINLDIMTASYIEEELKKVFI SKRLESLLVRATERFTYGLNLVLVLALVGVSLSVVGLFFWEIFHVFRGSVEKGILSALGTLLILWMMIELMDNEIKTLKG GRFNIQVFIGVVIIAIIREILISTLRHDPLETQVFLAGTLMVLGVVYYLVARSQQISPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34410; Mature: 34410
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSMQEIKAHYLFGDEDAETLKSLLSIAQANRELMIEDFYDYLLGIPETAAFLQDDTVLQ CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RLKLSHGGWFVNLFRGVYDNQYLHDLQRVGHVHVKIGLNAHFVNAAMQKVRRFAVGMIRE HHHHCCCCHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH NFPDRDERRKKTEAVEKILDINLDIMTASYIEEELKKVFISKRLESLLVRATERFTYGLN CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLVLALVGVSLSVVGLFFWEIFHVFRGSVEKGILSALGTLLILWMMIELMDNEIKTLKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRFNIQVFIGVVIIAIIREILISTLRHDPLETQVFLAGTLMVLGVVYYLVARSQQISPIR CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYSMQEIKAHYLFGDEDAETLKSLLSIAQANRELMIEDFYDYLLGIPETAAFLQDDTVLQ CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RLKLSHGGWFVNLFRGVYDNQYLHDLQRVGHVHVKIGLNAHFVNAAMQKVRRFAVGMIRE HHHHCCCCHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH NFPDRDERRKKTEAVEKILDINLDIMTASYIEEELKKVFISKRLESLLVRATERFTYGLN CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLVLALVGVSLSVVGLFFWEIFHVFRGSVEKGILSALGTLLILWMMIELMDNEIKTLKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRFNIQVFIGVVIIAIIREILISTLRHDPLETQVFLAGTLMVLGVVYYLVARSQQISPIR CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA