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The map label for this gene is hdrB [H]

Identifier: 78221533

GI number: 78221533

Start: 350255

End: 351103

Strand: Direct

Name: hdrB [H]

Synonym: Gmet_0310

Alternate gene names: 78221533

Gene position: 350255-351103 (Clockwise)

Preceding gene: 78221532

Following gene: 78221534

Centisome position: 8.76

GC content: 63.96

Gene sequence:

>849_bases
ATGAGATACGCTTATTTCCTGAGTTGCATCAACGAGTCCATGACCAGGGAAGTGGACCAGTCCCTCCACCTGTGGAAAAA
GGACCTGGACCTCGAACTGGTGACCCTGGAGAACGGGACCTGCTGCGGGGGGAGCAACCTCGATTACGTGAGCCCCGACC
ACTTCATCATCGTCAACGGGCGGAACATCGCCCTTGCGGAGCAATTGGGGCTCGATCTCGTGACCTCCTGCAGCACCTGC
CTTCTGACCCTGCGCCGCGCCAAGCATCTCCTGGGCACCTCCCCCGAGAAGCGGGAGCTGGTGAATGCCCATCTGGCGGA
CGAAGGGCTCCGCTATGAAGGGGCCAGCGACGTGAAGCACCTCCTCTGGGTCATCAACGAGGATTACGGACTGGAGAGGC
TTGCCGGCAAGGTGACCGCCCCTCTCTGGGGGGTCCGCTTCGCCCCGTTCTACGGCTGCCACATCCTGCGCCCCTCCTCC
CTCCTGGGGAGGGACAACCCCGCCGCCCCCTCGTCCCTGGACCGCCTGGTTGAGGCCCTTGGCGGGAGCCTGGTGGAGTA
CGGCTCCAAGAACAAGTGCTGCGGCTTCCATACCCTCCTGGTGGCGGAGAAGCAGTCCCTCGCCATGACGGGGAACGCCC
TTGAGGATGCGCTCCGGGCCGGGGCCGACTACATCGTCACCCCGTGCCCCCTCTGTCACACCGCCCTCGATGCCTACCAG
GACAGGGCTCTGTCGGGACGTGCCGCGGCCGGAAACATTCCGGTCCTCCACCTCTCCCAGATGATCGGCCTCGCCTTGGG
ATATTCAAAAGAGGAGCTCGGCATAGACCGTCATATGGTCGCCGCATAG

Upstream 100 bases:

>100_bases
GCGACATTTACAGCCGCCTGGAGGCAAATCCGGGCGGGGAGGCTGTAGGGGCAATTCATGAATTGCCCCTACGGTCGGCG
CCACGAAGCGGAGAGTGCCT

Downstream 100 bases:

>100_bases
TCAGTCCGATACATTTTTGAGTGGACGAGCACTTACAGCCATGGGTGCTCCTTTCTCTGGCCGGGGGACGCTCCGGCCTT
TTTTATCCTTTCCCTCTTCG

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRYAYFLSCINESMTREVDQSLHLWKKDLDLELVTLENGTCCGGSNLDYVSPDHFIIVNGRNIALAEQLGLDLVTSCSTC
LLTLRRAKHLLGTSPEKRELVNAHLADEGLRYEGASDVKHLLWVINEDYGLERLAGKVTAPLWGVRFAPFYGCHILRPSS
LLGRDNPAAPSSLDRLVEALGGSLVEYGSKNKCCGFHTLLVAEKQSLAMTGNALEDALRAGADYIVTPCPLCHTALDAYQ
DRALSGRAAAGNIPVLHLSQMIGLALGYSKEELGIDRHMVAA

Sequences:

>Translated_282_residues
MRYAYFLSCINESMTREVDQSLHLWKKDLDLELVTLENGTCCGGSNLDYVSPDHFIIVNGRNIALAEQLGLDLVTSCSTC
LLTLRRAKHLLGTSPEKRELVNAHLADEGLRYEGASDVKHLLWVINEDYGLERLAGKVTAPLWGVRFAPFYGCHILRPSS
LLGRDNPAAPSSLDRLVEALGGSLVEYGSKNKCCGFHTLLVAEKQSLAMTGNALEDALRAGADYIVTPCPLCHTALDAYQ
DRALSGRAAAGNIPVLHLSQMIGLALGYSKEELGIDRHMVAA
>Mature_282_residues
MRYAYFLSCINESMTREVDQSLHLWKKDLDLELVTLENGTCCGGSNLDYVSPDHFIIVNGRNIALAEQLGLDLVTSCSTC
LLTLRRAKHLLGTSPEKRELVNAHLADEGLRYEGASDVKHLLWVINEDYGLERLAGKVTAPLWGVRFAPFYGCHILRPSS
LLGRDNPAAPSSLDRLVEALGGSLVEYGSKNKCCGFHTLLVAEKQSLAMTGNALEDALRAGADYIVTPCPLCHTALDAYQ
DRALSGRAAAGNIPVLHLSQMIGLALGYSKEELGIDRHMVAA

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 30725; Mature: 30725

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAYFLSCINESMTREVDQSLHLWKKDLDLELVTLENGTCCGGSNLDYVSPDHFIIVNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECC
RNIALAEQLGLDLVTSCSTCLLTLRRAKHLLGTSPEKRELVNAHLADEGLRYEGASDVKH
CCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
LLWVINEDYGLERLAGKVTAPLWGVRFAPFYGCHILRPSSLLGRDNPAAPSSLDRLVEAL
HHHHHCCCCCHHHHHHHHCCCHHCCCCCHHHCEEEECCHHHHCCCCCCCHHHHHHHHHHH
GGSLVEYGSKNKCCGFHTLLVAEKQSLAMTGNALEDALRAGADYIVTPCPLCHTALDAYQ
CCHHHHCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHCCCCEEECCCHHHHHHHHHHH
DRALSGRAAAGNIPVLHLSQMIGLALGYSKEELGIDRHMVAA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHCC
>Mature Secondary Structure
MRYAYFLSCINESMTREVDQSLHLWKKDLDLELVTLENGTCCGGSNLDYVSPDHFIIVNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECC
RNIALAEQLGLDLVTSCSTCLLTLRRAKHLLGTSPEKRELVNAHLADEGLRYEGASDVKH
CCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
LLWVINEDYGLERLAGKVTAPLWGVRFAPFYGCHILRPSSLLGRDNPAAPSSLDRLVEAL
HHHHHCCCCCHHHHHHHHCCCHHCCCCCHHHCEEEECCHHHHCCCCCCCHHHHHHHHHHH
GGSLVEYGSKNKCCGFHTLLVAEKQSLAMTGNALEDALRAGADYIVTPCPLCHTALDAYQ
CCHHHHCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHCCCCEEECCCHHHHHHHHHHH
DRALSGRAAAGNIPVLHLSQMIGLALGYSKEELGIDRHMVAA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]