| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ppc [H]
Identifier: 78221527
GI number: 78221527
Start: 339632
End: 342427
Strand: Reverse
Name: ppc [H]
Synonym: Gmet_0304
Alternate gene names: 78221527
Gene position: 342427-339632 (Counterclockwise)
Preceding gene: 78221535
Following gene: 78221518
Centisome position: 8.57
GC content: 67.95
Gene sequence:
>2796_bases ATGGCGGAACGAGAGCTGTTCTGGAAGGCGGACGACCAGGCCGTGCGGCTGAACGAGCTGATGACCCTGGACCCGGCCCT GAAGGATATCCCGCTGCGGCGCGATGTCCGCTCCCTGGGTCGGTTGCTGGGTGAGGTGATCAAGGAGCAGGCGGGGCCGG CTGCCTACGATGCCGAGGAAGAGCTCCGTCGGCTGGCCATCAGCCATCGGGCACTCGCCGACCAGGAGGAAGCGGTCCTC GACAGCCCCGCCGAGCAGGAACTCCAGGAACGGGCCGTCAGGATCGTGGGAACGATGACCGTGGCCGAGACCTACCAGAT CGTCAAGGCCTTCGGGACCTTCTTCGAGCTCACCAACCTGGCGGAGACCAACCACCGGATGCGCCGGCGCCGGGCCACGC AACTTTCACCCGCTGCCCCCGTGAAGCCCGGTTCCCTGCTGGGCACCCTGATGCGGATGCGGGATGGGGGAATAACGGCC GAAAAAGCCCTCGATCTGCTGCGGCAGGTGGAGATCATGCCGGTCTTCACCGCTCATCCGACGGAAGTGGCGCGGCGTGT GGTCCTCTTCAAGCGACGCCGGATCGCCCGGGAGCTGGCGGAGCTTGACCTCCTCCCCCTGGCCGGCGACGAGGCTGACC GGCGACAGGAGGCCATCTTCGCGGAGATCACCGCCCTCTGGCAGACGGACGAGGTGCGCCGCCGTCCCCAGGGGGTGACC GACGAGATCAGGATGGGGCTCGACCACTATCCCGGCTCCCTCATGGCGCCCCTGGCGGGCCTCTATGAAGAAATGGCCGA GGATTTCCGCCAGGTCTACGGCGCGGACCTCCCCGATGCTGCCTTCCCCACCGTGATCCGCTTCGGCTCCTGGATCGGCG GGGATCGGGACGGCAACCCCAACGTGACAGTCGGCACCACCCGACACGCCCTGGAATCAGCCCGCCAGATGATCCTCGCC CGGTACCTGGACGGGGTCGAGGAACTGAAGGAGCTCCTGACGCCGTCAACCAATCGGGTGACGGTCTCGCCGCAGCTCCG GGAGGCCCTGGAGCGCTATGTCGCCGCCCTGGCCGGAGCAGCCGCGGAAACCGGCATCTACCCCGAGTGCGAGCCATACC GGAAATTCCTCCGGTGTGTCCACCACCGCCTCATGCAGACCCGCGACGGGGAAGACCACCCCGACGCCTATCCCGATGCC GGAGCCTTCGCCGCCGACCTCATGCTGGTGCGCACAAGCCTCGCCCAGGGGGAAGGGGAGCGGCTGGCACGCCGCTACGT GGACCCGCTCCTGCGGCAGGTGGAGACCTTCGGCTTCCACCTCCACGCCCTCGATATCCGGCAGCATGCCCGGATCCATG CCCGGGCCGTGGCAGAGCTGGCCGCCGGCGCCGGCAGCTGCGAGGAGGGGGTTCACCCCGTCCCTCCCCCCCCGTCCGCC GAGACCACCGAACTCCTCGACACCCTCCGGGCCGTGGCAAAGCTGAAGCAGCGCTACTCCCCCAAGGCAATCAGGAGCTA CGTCATCAGCGGCGCCTCCTCGGCCCGGGACACCCTCTCCCTCATCTGGCTCATGGAGCTCTGCGGCATCCGCGTGGCCG CCTCGCCGGACGGAAAGGACCCGGGGGTGATGCCGGTCCCCCTCTTCGAGTCCATCGAAGACCTGCGCAACGCGCCGGGG ATCTGCCGCGCCCTCTGGTGCTCGCCCGAATACGGGCCGTTTCTCGATTCGTGGGGACGCCGGCAAGAGGTGATGCTCGG CTATTCGGATTCCAACAAGGACGGGGGGATGTTCACGAGCACCTGGGAGATCCACAAGGCCCACCGGGATCTCCAGCGGG TGGCCCAGGAGTGCGGAGTGCGTCTGCGCCTCTTTCACGGCCGCGGCGGCACCGTGGGGAGGGGGGGCGGCCCCACCCAC CGGGCCATCATCGCCCAGCCGGCCGACGGCTTCTCCGGCGCCCTCAAGATCACCGAGCAGGGAGAGGTCATCAACTGGAA ATACTCCGACCCGTCCCTGGCGAAACGGAACCTGGAGCTGATGGTGGCCGCCTCCCTGGAGACCCTGGCCCGCGCCGGCC TCGTGGAGACACGGCCCGAGCCGGCATGGGAGGAAGCCCTGGAGGAGATGTCGGGGAGCGCCTTCACCTTCTACCGTGAG CGGATCACCGGCAACCCCGACATCCTCCCCTACTTCGAGCAGGCCACGCCGGTCCTGGAATTCGAGCTGGCAAAGATCGG CTCCCGCCCCGCGCGCCGGAGCCGGAGCCGGGATATAGCGGAGCTGCGGGCCATACCCTGGGGCTTCGGCTGGATACAGA GCCGCCACGTGATACCGGGCTGGTTCGGGGTCGGCTTCGCCCTGGATCGCTTCGCCGTCGGGGGAGAAGGTCGGTTGGAG TTCCTCAGGTCCATGATGGGGCGCTTCCCCTTCTTTTTCGATCTGATCAGGAACGTGGAACTGGCCCTCACCAAGGTGGA TCTCCCCCTGGCCCGACTCTACGCGTCCCTGGTGACCGACGCGGGAATTCGCGAGCGGGTCTTCGCCATGATCGTGGAGG AATACCAACGGACCCGGCGGATGGTCCTGGCGGTCACGGGCCAGGCGCGGCTTCTGGAAAAGAACCCGGCCCTGACCGCG TCGCTGCGGCTGCGGAACCCCTACATCGACCCCCTGAGCATGATCCAGATCGAGCTCCTGCGGCGCAAGCGGGCCGGGGA AGAGAGCGACGAGCTGAACTACGTCCTGGCGGCCACCATCAACGGCATTGCCGCGGGGCTAAGGAACACGGGATAA
Upstream 100 bases:
>100_bases GCAAGCGCCACCCCTTCACGTGGGAATGCCAACCCAGCGGCACGGCATTTGAATCACAGCAGCAACAACAGGGACACAAC CATCACCGGAGGATGAAATC
Downstream 100 bases:
>100_bases CAGGGACCGAAGGGAAGGGAGAAAGGGTTACACTGCCCCCTTGGCCTCACCTTCGGCAATCTCCAGGATCTCCCGGTAAA TGGCGATCATGACCCCTGCC
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 931; Mature: 930
Protein sequence:
>931_residues MAERELFWKADDQAVRLNELMTLDPALKDIPLRRDVRSLGRLLGEVIKEQAGPAAYDAEEELRRLAISHRALADQEEAVL DSPAEQELQERAVRIVGTMTVAETYQIVKAFGTFFELTNLAETNHRMRRRRATQLSPAAPVKPGSLLGTLMRMRDGGITA EKALDLLRQVEIMPVFTAHPTEVARRVVLFKRRRIARELAELDLLPLAGDEADRRQEAIFAEITALWQTDEVRRRPQGVT DEIRMGLDHYPGSLMAPLAGLYEEMAEDFRQVYGADLPDAAFPTVIRFGSWIGGDRDGNPNVTVGTTRHALESARQMILA RYLDGVEELKELLTPSTNRVTVSPQLREALERYVAALAGAAAETGIYPECEPYRKFLRCVHHRLMQTRDGEDHPDAYPDA GAFAADLMLVRTSLAQGEGERLARRYVDPLLRQVETFGFHLHALDIRQHARIHARAVAELAAGAGSCEEGVHPVPPPPSA ETTELLDTLRAVAKLKQRYSPKAIRSYVISGASSARDTLSLIWLMELCGIRVAASPDGKDPGVMPVPLFESIEDLRNAPG ICRALWCSPEYGPFLDSWGRRQEVMLGYSDSNKDGGMFTSTWEIHKAHRDLQRVAQECGVRLRLFHGRGGTVGRGGGPTH RAIIAQPADGFSGALKITEQGEVINWKYSDPSLAKRNLELMVAASLETLARAGLVETRPEPAWEEALEEMSGSAFTFYRE RITGNPDILPYFEQATPVLEFELAKIGSRPARRSRSRDIAELRAIPWGFGWIQSRHVIPGWFGVGFALDRFAVGGEGRLE FLRSMMGRFPFFFDLIRNVELALTKVDLPLARLYASLVTDAGIRERVFAMIVEEYQRTRRMVLAVTGQARLLEKNPALTA SLRLRNPYIDPLSMIQIELLRRKRAGEESDELNYVLAATINGIAAGLRNTG
Sequences:
>Translated_931_residues MAERELFWKADDQAVRLNELMTLDPALKDIPLRRDVRSLGRLLGEVIKEQAGPAAYDAEEELRRLAISHRALADQEEAVL DSPAEQELQERAVRIVGTMTVAETYQIVKAFGTFFELTNLAETNHRMRRRRATQLSPAAPVKPGSLLGTLMRMRDGGITA EKALDLLRQVEIMPVFTAHPTEVARRVVLFKRRRIARELAELDLLPLAGDEADRRQEAIFAEITALWQTDEVRRRPQGVT DEIRMGLDHYPGSLMAPLAGLYEEMAEDFRQVYGADLPDAAFPTVIRFGSWIGGDRDGNPNVTVGTTRHALESARQMILA RYLDGVEELKELLTPSTNRVTVSPQLREALERYVAALAGAAAETGIYPECEPYRKFLRCVHHRLMQTRDGEDHPDAYPDA GAFAADLMLVRTSLAQGEGERLARRYVDPLLRQVETFGFHLHALDIRQHARIHARAVAELAAGAGSCEEGVHPVPPPPSA ETTELLDTLRAVAKLKQRYSPKAIRSYVISGASSARDTLSLIWLMELCGIRVAASPDGKDPGVMPVPLFESIEDLRNAPG ICRALWCSPEYGPFLDSWGRRQEVMLGYSDSNKDGGMFTSTWEIHKAHRDLQRVAQECGVRLRLFHGRGGTVGRGGGPTH RAIIAQPADGFSGALKITEQGEVINWKYSDPSLAKRNLELMVAASLETLARAGLVETRPEPAWEEALEEMSGSAFTFYRE RITGNPDILPYFEQATPVLEFELAKIGSRPARRSRSRDIAELRAIPWGFGWIQSRHVIPGWFGVGFALDRFAVGGEGRLE FLRSMMGRFPFFFDLIRNVELALTKVDLPLARLYASLVTDAGIRERVFAMIVEEYQRTRRMVLAVTGQARLLEKNPALTA SLRLRNPYIDPLSMIQIELLRRKRAGEESDELNYVLAATINGIAAGLRNTG >Mature_930_residues AERELFWKADDQAVRLNELMTLDPALKDIPLRRDVRSLGRLLGEVIKEQAGPAAYDAEEELRRLAISHRALADQEEAVLD SPAEQELQERAVRIVGTMTVAETYQIVKAFGTFFELTNLAETNHRMRRRRATQLSPAAPVKPGSLLGTLMRMRDGGITAE KALDLLRQVEIMPVFTAHPTEVARRVVLFKRRRIARELAELDLLPLAGDEADRRQEAIFAEITALWQTDEVRRRPQGVTD EIRMGLDHYPGSLMAPLAGLYEEMAEDFRQVYGADLPDAAFPTVIRFGSWIGGDRDGNPNVTVGTTRHALESARQMILAR YLDGVEELKELLTPSTNRVTVSPQLREALERYVAALAGAAAETGIYPECEPYRKFLRCVHHRLMQTRDGEDHPDAYPDAG AFAADLMLVRTSLAQGEGERLARRYVDPLLRQVETFGFHLHALDIRQHARIHARAVAELAAGAGSCEEGVHPVPPPPSAE TTELLDTLRAVAKLKQRYSPKAIRSYVISGASSARDTLSLIWLMELCGIRVAASPDGKDPGVMPVPLFESIEDLRNAPGI CRALWCSPEYGPFLDSWGRRQEVMLGYSDSNKDGGMFTSTWEIHKAHRDLQRVAQECGVRLRLFHGRGGTVGRGGGPTHR AIIAQPADGFSGALKITEQGEVINWKYSDPSLAKRNLELMVAASLETLARAGLVETRPEPAWEEALEEMSGSAFTFYRER ITGNPDILPYFEQATPVLEFELAKIGSRPARRSRSRDIAELRAIPWGFGWIQSRHVIPGWFGVGFALDRFAVGGEGRLEF LRSMMGRFPFFFDLIRNVELALTKVDLPLARLYASLVTDAGIRERVFAMIVEEYQRTRRMVLAVTGQARLLEKNPALTAS LRLRNPYIDPLSMIQIELLRRKRAGEESDELNYVLAATINGIAAGLRNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=944, Percent_Identity=33.0508474576271, Blast_Score=379, Evalue=1e-106,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 103903; Mature: 103772
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERELFWKADDQAVRLNELMTLDPALKDIPLRRDVRSLGRLLGEVIKEQAGPAAYDAEE CCCCCCEECCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH ELRRLAISHRALADQEEAVLDSPAEQELQERAVRIVGTMTVAETYQIVKAFGTFFELTNL HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETNHRMRRRRATQLSPAAPVKPGSLLGTLMRMRDGGITAEKALDLLRQVEIMPVFTAHP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCH TEVARRVVLFKRRRIARELAELDLLPLAGDEADRRQEAIFAEITALWQTDEVRRRPQGVT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC DEIRMGLDHYPGSLMAPLAGLYEEMAEDFRQVYGADLPDAAFPTVIRFGSWIGGDRDGNP HHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC NVTVGTTRHALESARQMILARYLDGVEELKELLTPSTNRVTVSPQLREALERYVAALAGA CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH AAETGIYPECEPYRKFLRCVHHRLMQTRDGEDHPDAYPDAGAFAADLMLVRTSLAQGEGE HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH RLARRYVDPLLRQVETFGFHLHALDIRQHARIHARAVAELAAGAGSCEEGVHPVPPPPSA HHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ETTELLDTLRAVAKLKQRYSPKAIRSYVISGASSARDTLSLIWLMELCGIRVAASPDGKD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCC PGVMPVPLFESIEDLRNAPGICRALWCSPEYGPFLDSWGRRQEVMLGYSDSNKDGGMFTS CCCCCCHHHHHHHHHHCCCCHHHHEECCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEC TWEIHKAHRDLQRVAQECGVRLRLFHGRGGTVGRGGGPTHRAIIAQPADGFSGALKITEQ HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECC GEVINWKYSDPSLAKRNLELMVAASLETLARAGLVETRPEPAWEEALEEMSGSAFTFYRE CCEEEEECCCHHHHHCCHHHEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEHHHH RITGNPDILPYFEQATPVLEFELAKIGSRPARRSRSRDIAELRAIPWGFGWIQSRHVIPG HHCCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCCHHHHCCCCCCCC WFGVGFALDRFAVGGEGRLEFLRSMMGRFPFFFDLIRNVELALTKVDLPLARLYASLVTD HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCHHHHHEECCCHHHHHHHHHHHC AGIRERVFAMIVEEYQRTRRMVLAVTGQARLLEKNPALTASLRLRNPYIDPLSMIQIELL CCHHHHHHHHHHHHHHHHHHEEEEECCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHH RRKRAGEESDELNYVLAATINGIAAGLRNTG HHHHCCCCCCCCCEEHHHHHHHHHHHHCCCC >Mature Secondary Structure AERELFWKADDQAVRLNELMTLDPALKDIPLRRDVRSLGRLLGEVIKEQAGPAAYDAEE CCCCCEECCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH ELRRLAISHRALADQEEAVLDSPAEQELQERAVRIVGTMTVAETYQIVKAFGTFFELTNL HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETNHRMRRRRATQLSPAAPVKPGSLLGTLMRMRDGGITAEKALDLLRQVEIMPVFTAHP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCH TEVARRVVLFKRRRIARELAELDLLPLAGDEADRRQEAIFAEITALWQTDEVRRRPQGVT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC DEIRMGLDHYPGSLMAPLAGLYEEMAEDFRQVYGADLPDAAFPTVIRFGSWIGGDRDGNP HHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC NVTVGTTRHALESARQMILARYLDGVEELKELLTPSTNRVTVSPQLREALERYVAALAGA CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH AAETGIYPECEPYRKFLRCVHHRLMQTRDGEDHPDAYPDAGAFAADLMLVRTSLAQGEGE HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH RLARRYVDPLLRQVETFGFHLHALDIRQHARIHARAVAELAAGAGSCEEGVHPVPPPPSA HHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ETTELLDTLRAVAKLKQRYSPKAIRSYVISGASSARDTLSLIWLMELCGIRVAASPDGKD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCC PGVMPVPLFESIEDLRNAPGICRALWCSPEYGPFLDSWGRRQEVMLGYSDSNKDGGMFTS CCCCCCHHHHHHHHHHCCCCHHHHEECCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEC TWEIHKAHRDLQRVAQECGVRLRLFHGRGGTVGRGGGPTHRAIIAQPADGFSGALKITEQ HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECC GEVINWKYSDPSLAKRNLELMVAASLETLARAGLVETRPEPAWEEALEEMSGSAFTFYRE CCEEEEECCCHHHHHCCHHHEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEHHHH RITGNPDILPYFEQATPVLEFELAKIGSRPARRSRSRDIAELRAIPWGFGWIQSRHVIPG HHCCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCCHHHHCCCCCCCC WFGVGFALDRFAVGGEGRLEFLRSMMGRFPFFFDLIRNVELALTKVDLPLARLYASLVTD HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCHHHHHEECCCHHHHHHHHHHHC AGIRERVFAMIVEEYQRTRRMVLAVTGQARLLEKNPALTASLRLRNPYIDPLSMIQIELL CCHHHHHHHHHHHHHHHHHHEEEEECCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHH RRKRAGEESDELNYVLAATINGIAAGLRNTG HHHHCCCCCCCCCEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]