| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cvfB [H]
Identifier: 78221458
GI number: 78221458
Start: 266657
End: 267544
Strand: Direct
Name: cvfB [H]
Synonym: Gmet_0235
Alternate gene names: 78221458
Gene position: 266657-267544 (Clockwise)
Preceding gene: 78221457
Following gene: 78221459
Centisome position: 6.67
GC content: 65.54
Gene sequence:
>888_bases ATGGAATACACTGAACAGCCTGGACTCTGTCGTCTGCACACCCTGAAGGTCGTCCGCGTTGACAAGCAAGGCGTCTGGCT GGAGGCCGGCGGGCGCCTGGCGCACCTGCCCCGGCGGGAGGCGCCCCAATCGTCCCCCGGTGACCCGGTGGACGTATTTC TCTATCAGGACGGGGTTGGAGAGTTGCAGGCCACGTGCCGTCTCCCGCTGGCCCAGGCCGGTGAGTTTGCGCTGCTGACG GTCAAGTCGGTCGGTTCCCACGGGGCGTTCCTCGACTGGGGCCTGGCAAAGGATCTGCTGGCGCCGTATCGCCTCCAGCC CGAGCGGATGCAGGTCGCCAGGAGCTACCTCGTGAAGGTCGATCTCGACCCGCAGGGGCGCCCTTTTGCCAATGCCCGTA TCGACGACTGCCTTGACCGCGGGCGGCCCGACCTGCGTGAAGGGGATGCGGTGGACCTGCTCGTCTGGCAGTTCACCGAC CTGGGCGCCAAGGTCATTGTCAATCACCGGTATCCCGCCCTCCTCTACCGGGACGAACTGCCGGCCGGGGCCATTGTCGG CATGCCGCTGTCCGGTTATGTGAAGCGACTGCGCGAAGACGGCAGGCTCGATGTCACCCTCCGCAAGGTGGGGGCCGAGG CGGTGTCGGACGCACGGGATGCCATCCTCGCGGCGTTGGCTGCCCATGGCGGCACCTTGCCCCTTCATGACCGGAGCTCA CCGGCAGCCATCGAGAAGGCTCTGGGCATGAGCAAGAAGAGCTTCAAGAAGGCGGTGGGGGGTCTCTACAAGGACGGTCT GGTGACCTTGAACGATGAGGGAATTAGGCTGACGGGGAAAGGTACGGCCAACAGCCAGTCCCCGGAAAGGGACCGTCCGT TGCCATGA
Upstream 100 bases:
>100_bases GGGGAAGAGGTTTACCGAGGGGAAAGATTAGCCTTACAACGTCCCGGAGTCCCATGCTATCCTGCGTGGAACAAGCACTG AGACATCCGTGGAGGATAGC
Downstream 100 bases:
>100_bases CAAAAGAGCAGTTGCTGAACCAGATTACGGCGGCCCTCGATGCCGATCTTGCTGTCCTCGCCACCGCAGCCCGGTTCGCC CACGAGGCAGCGACCCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEYTEQPGLCRLHTLKVVRVDKQGVWLEAGGRLAHLPRREAPQSSPGDPVDVFLYQDGVGELQATCRLPLAQAGEFALLT VKSVGSHGAFLDWGLAKDLLAPYRLQPERMQVARSYLVKVDLDPQGRPFANARIDDCLDRGRPDLREGDAVDLLVWQFTD LGAKVIVNHRYPALLYRDELPAGAIVGMPLSGYVKRLREDGRLDVTLRKVGAEAVSDARDAILAALAAHGGTLPLHDRSS PAAIEKALGMSKKSFKKAVGGLYKDGLVTLNDEGIRLTGKGTANSQSPERDRPLP
Sequences:
>Translated_295_residues MEYTEQPGLCRLHTLKVVRVDKQGVWLEAGGRLAHLPRREAPQSSPGDPVDVFLYQDGVGELQATCRLPLAQAGEFALLT VKSVGSHGAFLDWGLAKDLLAPYRLQPERMQVARSYLVKVDLDPQGRPFANARIDDCLDRGRPDLREGDAVDLLVWQFTD LGAKVIVNHRYPALLYRDELPAGAIVGMPLSGYVKRLREDGRLDVTLRKVGAEAVSDARDAILAALAAHGGTLPLHDRSS PAAIEKALGMSKKSFKKAVGGLYKDGLVTLNDEGIRLTGKGTANSQSPERDRPLP >Mature_295_residues MEYTEQPGLCRLHTLKVVRVDKQGVWLEAGGRLAHLPRREAPQSSPGDPVDVFLYQDGVGELQATCRLPLAQAGEFALLT VKSVGSHGAFLDWGLAKDLLAPYRLQPERMQVARSYLVKVDLDPQGRPFANARIDDCLDRGRPDLREGDAVDLLVWQFTD LGAKVIVNHRYPALLYRDELPAGAIVGMPLSGYVKRLREDGRLDVTLRKVGAEAVSDARDAILAALAAHGGTLPLHDRSS PAAIEKALGMSKKSFKKAVGGLYKDGLVTLNDEGIRLTGKGTANSQSPERDRPLP
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CvfB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32130; Mature: 32130
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTEQPGLCRLHTLKVVRVDKQGVWLEAGGRLAHLPRREAPQSSPGDPVDVFLYQDGVG CCCCCCCCCEEEEEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCC ELQATCRLPLAQAGEFALLTVKSVGSHGAFLDWGLAKDLLAPYRLQPERMQVARSYLVKV HHHHHHCCCHHCCCCEEEEEEECCCCCCCEEECCHHHHHCCCCCCCHHHHHHHHHHEEEE DLDPQGRPFANARIDDCLDRGRPDLREGDAVDLLVWQFTDLGAKVIVNHRYPALLYRDEL EECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEECCC PAGAIVGMPLSGYVKRLREDGRLDVTLRKVGAEAVSDARDAILAALAAHGGTLPLHDRSS CCCEEECCCHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PAAIEKALGMSKKSFKKAVGGLYKDGLVTLNDEGIRLTGKGTANSQSPERDRPLP HHHHHHHHCCCHHHHHHHHCCHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MEYTEQPGLCRLHTLKVVRVDKQGVWLEAGGRLAHLPRREAPQSSPGDPVDVFLYQDGVG CCCCCCCCCEEEEEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCC ELQATCRLPLAQAGEFALLTVKSVGSHGAFLDWGLAKDLLAPYRLQPERMQVARSYLVKV HHHHHHCCCHHCCCCEEEEEEECCCCCCCEEECCHHHHHCCCCCCCHHHHHHHHHHEEEE DLDPQGRPFANARIDDCLDRGRPDLREGDAVDLLVWQFTDLGAKVIVNHRYPALLYRDEL EECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEECCC PAGAIVGMPLSGYVKRLREDGRLDVTLRKVGAEAVSDARDAILAALAAHGGTLPLHDRSS CCCEEECCCHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PAAIEKALGMSKKSFKKAVGGLYKDGLVTLNDEGIRLTGKGTANSQSPERDRPLP HHHHHHHHCCCHHHHHHHHCCHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA