| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221451
Identifier: 78221451
GI number: 78221451
Start: 260209
End: 260928
Strand: Reverse
Name: 78221451
Synonym: Gmet_0228
Alternate gene names: NA
Gene position: 260928-260209 (Counterclockwise)
Preceding gene: 78221453
Following gene: 78221448
Centisome position: 6.53
GC content: 63.06
Gene sequence:
>720_bases GTGACCCTGCATAATCTTCTCCTCATCTCGATTCCGGCCGTTGTCGCCCTGTGCGGGGGGTTCCTTGCCGCATTCTGGAA ACCGAACCATCAGAGTCGGAGCCTCATTCAGCATTTCGCTGCCGGCGTGGTTCTGGCGGCCCTGGCAGTGGAACTCCTGC CGGAGATCGGGCGGGAACACGCGCCCGGCCCGGTGCTGATCGGGGCCTTCGCCCTGGGGAGCCTTTTCATGTACGGCCTG AAGTTCTGGACCGAGCACCTCGAACATCAGGATCAGCTGGCCGGGATACGGGCAGGCATCGGGCGGGGGCTCCTGCTGGC AACCTTCATCGACGTGGCGGTGGATGGTTTCATCATCGGCGCCGGGTTCGCCGCCGGGGGGGAGACCGGGCCGATACTTG CCATCGGCCTGTCGGTGGAACTGCTTTTTTTGGGATTGGCCCTCACCTCCGACCAGGTCAGCGATCGGCAGATCGTCCTT GTCTCAGGGGGGCTCGGGGTAACGGTACTGCTCTGCGCGGTTCTCGGGAACATCCTTCTTGCGGGTGCCTCGCACACGGC AATCGGCGCAGCCCTTGCCTTCAGCGCCGCCGCGCTTCTCTACCTCGTCACCGAGGAGTTGCTGATGGAAGCCCATGTGG TGCAGGAGAAGCCGATTTCCACCCTCGTCCTCTTCGCCGGTTTTCTCACCTTCTGGAGCATTCAGCTCATGGGGGTATAA
Upstream 100 bases:
>100_bases GAACGCACGCTCCGTGAATGCTTATTGTTTTCGGCGTGACATGCGTGTATCAATCGGTTTCATGCGTTCAATGATGTCTC ACCCCTCAAAGAGGTGCCCC
Downstream 100 bases:
>100_bases TCTAGTCGCATATATATCCAGTCGGGAGAGGAGACTCCCGACCCTACCGTCAAGGAGGAGTCGCGATGATACGAATGATG ATAATTATGGGGATGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTLHNLLLISIPAVVALCGGFLAAFWKPNHQSRSLIQHFAAGVVLAALAVELLPEIGREHAPGPVLIGAFALGSLFMYGL KFWTEHLEHQDQLAGIRAGIGRGLLLATFIDVAVDGFIIGAGFAAGGETGPILAIGLSVELLFLGLALTSDQVSDRQIVL VSGGLGVTVLLCAVLGNILLAGASHTAIGAALAFSAAALLYLVTEELLMEAHVVQEKPISTLVLFAGFLTFWSIQLMGV
Sequences:
>Translated_239_residues MTLHNLLLISIPAVVALCGGFLAAFWKPNHQSRSLIQHFAAGVVLAALAVELLPEIGREHAPGPVLIGAFALGSLFMYGL KFWTEHLEHQDQLAGIRAGIGRGLLLATFIDVAVDGFIIGAGFAAGGETGPILAIGLSVELLFLGLALTSDQVSDRQIVL VSGGLGVTVLLCAVLGNILLAGASHTAIGAALAFSAAALLYLVTEELLMEAHVVQEKPISTLVLFAGFLTFWSIQLMGV >Mature_238_residues TLHNLLLISIPAVVALCGGFLAAFWKPNHQSRSLIQHFAAGVVLAALAVELLPEIGREHAPGPVLIGAFALGSLFMYGLK FWTEHLEHQDQLAGIRAGIGRGLLLATFIDVAVDGFIIGAGFAAGGETGPILAIGLSVELLFLGLALTSDQVSDRQIVLV SGGLGVTVLLCAVLGNILLAGASHTAIGAALAFSAAALLYLVTEELLMEAHVVQEKPISTLVLFAGFLTFWSIQLMGV
Specific function: Unknown
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24885; Mature: 24754
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHNLLLISIPAVVALCGGFLAAFWKPNHQSRSLIQHFAAGVVLAALAVELLPEIGREH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APGPVLIGAFALGSLFMYGLKFWTEHLEHQDQLAGIRAGIGRGLLLATFIDVAVDGFIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEE AGFAAGGETGPILAIGLSVELLFLGLALTSDQVSDRQIVLVSGGLGVTVLLCAVLGNILL CCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH AGASHTAIGAALAFSAAALLYLVTEELLMEAHVVQEKPISTLVLFAGFLTFWSIQLMGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLHNLLLISIPAVVALCGGFLAAFWKPNHQSRSLIQHFAAGVVLAALAVELLPEIGREH CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APGPVLIGAFALGSLFMYGLKFWTEHLEHQDQLAGIRAGIGRGLLLATFIDVAVDGFIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEE AGFAAGGETGPILAIGLSVELLFLGLALTSDQVSDRQIVLVSGGLGVTVLLCAVLGNILL CCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH AGASHTAIGAALAFSAAALLYLVTEELLMEAHVVQEKPISTLVLFAGFLTFWSIQLMGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA