| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221405
Identifier: 78221405
GI number: 78221405
Start: 209936
End: 210358
Strand: Direct
Name: 78221405
Synonym: Gmet_0181
Alternate gene names: NA
Gene position: 209936-210358 (Clockwise)
Preceding gene: 78221404
Following gene: 78221406
Centisome position: 5.25
GC content: 65.01
Gene sequence:
>423_bases ATGCCAGTCCCTCCCGAATTTCCCCTCAGTGTCTTCTACGACGGCTCCTGCTCCGTCTGCGCCACGGAGATGGAGGCCTA CATGCGCAAGGAGCACGGGGGGCGCCTCCTGTTCGTCGACATCAGCGCCCCTTCCTTCGACCCCACCCCCTACGGCATCA CTCTCGACGCGTTTATGTACCAGATGCACGCCATCGACCGGACCGGCCGGGTCTACCTGTCCGTGGAGGCGTTCTGGGCG ATCTGGCAGGCCTTTCCGGCCTCAACCCTCTATGGATTCCTCGGTGCCCTCGTGATGCTTCCGGGGGTGAACCTTCTGGC CCGGGCCGGTTACCGGGGTTTCGCCCGCATCAGGAAATACCTCCCCCGTCGCCGTGAAACGTGCGCAGGGGGGAGCTGCC GGATCGGGCAGCGGGAAGAGTGA
Upstream 100 bases:
>100_bases GCGTGGCCGAGCAGCTTTTCCGGCTCTACCCCTGAGGCGGGTTGCCGTCGGCCGGTTCCGTGGTATAGGTTTCGGAACGA TCCGACTGCGAGGTCTGCCG
Downstream 100 bases:
>100_bases TCCTGCACACGAAGGGAGACAAAGCCATGGGTGAAGAGGCGTCACGGTGCCGGTGCGGCCAGGGGAAGCCCGGCGAGAAG TGTCCCCACTGCGGCAAGGA
Product: putative thiol-disulphide oxidoreductase DCC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWA IWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE
Sequences:
>Translated_140_residues MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWA IWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE >Mature_139_residues PVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWAI WQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15729; Mature: 15598
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMY CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHH QMHAIDRTGRVYLSVEAFWAIWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKY HHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH LPRRRETCAGGSCRIGQREE CCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMY CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHH QMHAIDRTGRVYLSVEAFWAIWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKY HHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH LPRRRETCAGGSCRIGQREE CCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA