Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221405

Identifier: 78221405

GI number: 78221405

Start: 209936

End: 210358

Strand: Direct

Name: 78221405

Synonym: Gmet_0181

Alternate gene names: NA

Gene position: 209936-210358 (Clockwise)

Preceding gene: 78221404

Following gene: 78221406

Centisome position: 5.25

GC content: 65.01

Gene sequence:

>423_bases
ATGCCAGTCCCTCCCGAATTTCCCCTCAGTGTCTTCTACGACGGCTCCTGCTCCGTCTGCGCCACGGAGATGGAGGCCTA
CATGCGCAAGGAGCACGGGGGGCGCCTCCTGTTCGTCGACATCAGCGCCCCTTCCTTCGACCCCACCCCCTACGGCATCA
CTCTCGACGCGTTTATGTACCAGATGCACGCCATCGACCGGACCGGCCGGGTCTACCTGTCCGTGGAGGCGTTCTGGGCG
ATCTGGCAGGCCTTTCCGGCCTCAACCCTCTATGGATTCCTCGGTGCCCTCGTGATGCTTCCGGGGGTGAACCTTCTGGC
CCGGGCCGGTTACCGGGGTTTCGCCCGCATCAGGAAATACCTCCCCCGTCGCCGTGAAACGTGCGCAGGGGGGAGCTGCC
GGATCGGGCAGCGGGAAGAGTGA

Upstream 100 bases:

>100_bases
GCGTGGCCGAGCAGCTTTTCCGGCTCTACCCCTGAGGCGGGTTGCCGTCGGCCGGTTCCGTGGTATAGGTTTCGGAACGA
TCCGACTGCGAGGTCTGCCG

Downstream 100 bases:

>100_bases
TCCTGCACACGAAGGGAGACAAAGCCATGGGTGAAGAGGCGTCACGGTGCCGGTGCGGCCAGGGGAAGCCCGGCGAGAAG
TGTCCCCACTGCGGCAAGGA

Product: putative thiol-disulphide oxidoreductase DCC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWA
IWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE

Sequences:

>Translated_140_residues
MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWA
IWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE
>Mature_139_residues
PVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMYQMHAIDRTGRVYLSVEAFWAI
WQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKYLPRRRETCAGGSCRIGQREE

Specific function: Unknown

COG id: COG3011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15729; Mature: 15598

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMY
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHH
QMHAIDRTGRVYLSVEAFWAIWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKY
HHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
LPRRRETCAGGSCRIGQREE
CCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PVPPEFPLSVFYDGSCSVCATEMEAYMRKEHGGRLLFVDISAPSFDPTPYGITLDAFMY
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHH
QMHAIDRTGRVYLSVEAFWAIWQAFPASTLYGFLGALVMLPGVNLLARAGYRGFARIRKY
HHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
LPRRRETCAGGSCRIGQREE
CCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA