| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221340
Identifier: 78221340
GI number: 78221340
Start: 140100
End: 140462
Strand: Direct
Name: 78221340
Synonym: Gmet_0113
Alternate gene names: NA
Gene position: 140100-140462 (Clockwise)
Preceding gene: 78221331
Following gene: 78221348
Centisome position: 3.5
GC content: 57.3
Gene sequence:
>363_bases ATGACAGGACGTGAGATTGAAAAGGAAATTCGCGACGGGAGGAAGGCTGACCAACCGTTTATCAAGTGGTGCCGGAAGGA GAACGACTTTGTCGACTACGAACTCGTTAACAGCTTCCTCGCCAGCGTGGGGAGCGGCGACGAGTTCGCCAGCTACGAAC TCCTGACCATGGACCAGATGTGGAATGTGCTCAAGGAGTTCGACCCGAAAGGGGTATCGCGGGGGGAAAAAGGGGGCGAG GAGGTTATCTTCTGGGAGCAGACACTGGCTGATGGTACCACCAAGAACCGGGCCTGCCCCTACACGCCCGACTCGCTCAT CTCGGTCTTTGATGCGGTCACCAAGGGAAACCCGGTGGACTGA
Upstream 100 bases:
>100_bases GCCGCCAGCCAGTAAGGTCACGGATCGGGAAACGCCACGAACCATCATTGCTCCTGGCACTGTGTGGCTGACATGGCCAG GCGGCGGAAGAGGAGGAGAC
Downstream 100 bases:
>100_bases TAGAGGCGGTTGCTATGACGCGACCGGGGGGACTTTCGATTTTTCTTCCTCGGTCGCTTCGTTATTCTCCGCAAAGCCGT AGAACTCCTCGATCACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTGREIEKEIRDGRKADQPFIKWCRKENDFVDYELVNSFLASVGSGDEFASYELLTMDQMWNVLKEFDPKGVSRGEKGGE EVIFWEQTLADGTTKNRACPYTPDSLISVFDAVTKGNPVD
Sequences:
>Translated_120_residues MTGREIEKEIRDGRKADQPFIKWCRKENDFVDYELVNSFLASVGSGDEFASYELLTMDQMWNVLKEFDPKGVSRGEKGGE EVIFWEQTLADGTTKNRACPYTPDSLISVFDAVTKGNPVD >Mature_119_residues TGREIEKEIRDGRKADQPFIKWCRKENDFVDYELVNSFLASVGSGDEFASYELLTMDQMWNVLKEFDPKGVSRGEKGGEE VIFWEQTLADGTTKNRACPYTPDSLISVFDAVTKGNPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13607; Mature: 13476
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGREIEKEIRDGRKADQPFIKWCRKENDFVDYELVNSFLASVGSGDEFASYELLTMDQM CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH WNVLKEFDPKGVSRGEKGGEEVIFWEQTLADGTTKNRACPYTPDSLISVFDAVTKGNPVD HHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TGREIEKEIRDGRKADQPFIKWCRKENDFVDYELVNSFLASVGSGDEFASYELLTMDQM CCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH WNVLKEFDPKGVSRGEKGGEEVIFWEQTLADGTTKNRACPYTPDSLISVFDAVTKGNPVD HHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA