| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221335
Identifier: 78221335
GI number: 78221335
Start: 134615
End: 135493
Strand: Reverse
Name: 78221335
Synonym: Gmet_0108
Alternate gene names: NA
Gene position: 135493-134615 (Counterclockwise)
Preceding gene: 78221336
Following gene: 78221334
Centisome position: 3.39
GC content: 62.91
Gene sequence:
>879_bases ATGAGCAATCTCCCGTTCCATCAATTTTGCGGTACCGAGGGGTACGTCGCCTCCAGGGCGCTCCAGGACGTGGTCAACGT GGCCATTGCCCTGGAACGGCCGCTGTTGCTCAAGGGGGAGCCGGGCACGGGAAAAACTCTTCTCGCCTACCATATCGCCA AGGCATTGGGGATGGAGATCATCCTGTGGAACGTGAAGTCCACCACAAAGGCCCGCGACGGCCTCTATACCTACGACACG GTCCAGCGCCTGAATGATGCCCGCTTCGGCGATGGAGACGTCCGGGACATCCGCCACTACATCAAGCTCGGTCCTCTGGG AAGGGCCTTCGGGAGCGCGGAGCGGGTGGTGCTCCTCATCGACGAGGTGGACAAGGCAGACATAGAGTTTCCCAATGACC TGCTGTTCGAGCTGGACGAGATGCGTTTCCACGTCTTGGAGACCGACGAATGGGTGTCGGCCGCCCATCGTCCGGTGGTG ATCGTTACATCGAACTCGGAGAAGGAGCTTCCCGACGCGTTCCTGCGCCGCTGCGTATTCCACTACATCGACTTTCCGGA CGAGACGCAGATGCGCGCCATCATCGATGTCCACTTTCCGGACCTGCCCGCCGAGCTCATGAGGAGTGCCTGCAAGGTCT TCTACGGTCTGCGCGAGGTGCCGGGATTGCGCAAGCGCCCTTCCACCTCGGAGCTGCTGGACTGGATCCGGGTGCTGCTG GCCAGCGGCGCACGGCTGCCGGAGGAGGAGACTCCCGCGCTCCAATCGGTGCCGTTTCTGGGCGCCCTCGTCAAGATACA GGAGGATGCCGACATCCTCGCCCACCACGCCAGCCGGTCGGCAGATGTCCGCACCGCGGGCCGCCGCTTTTTCCGCTGA
Upstream 100 bases:
>100_bases AAGTGAGCGCCTATGTTGACAGTAAAATGGTAAAATGGTACCTTTATATTAAAATATGGCAGCACGCAATCGGCAAGAAT AGCAAATAAAGGAGAGCACC
Downstream 100 bases:
>100_bases TGTTTCTGGCTCTCTACCACTCACTGCGGGCGCTCAAGGTGCCGGTGAGCCTCACCGAGTGGCTTACCCTGCTGGAGGGG CTTGCCAATGGGCTCCACAA
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA Family ATPase; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; MoxR Family ATPase; Aaa ATPase; ATPase Associated With Various Cellular; Chaperone ClpB; ClpA/ClpB Family Protein; Oxidoreductase; ATPase Aaa Family; AAA ATPase Central RegionATPase; AAA ATPase Family Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; MoxR-Like ATPase CoxD; CoxD-Like Protein; ATPase Protein; ATP-Dependent Protease Subunit
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSNLPFHQFCGTEGYVASRALQDVVNVAIALERPLLLKGEPGTGKTLLAYHIAKALGMEIILWNVKSTTKARDGLYTYDT VQRLNDARFGDGDVRDIRHYIKLGPLGRAFGSAERVVLLIDEVDKADIEFPNDLLFELDEMRFHVLETDEWVSAAHRPVV IVTSNSEKELPDAFLRRCVFHYIDFPDETQMRAIIDVHFPDLPAELMRSACKVFYGLREVPGLRKRPSTSELLDWIRVLL ASGARLPEEETPALQSVPFLGALVKIQEDADILAHHASRSADVRTAGRRFFR
Sequences:
>Translated_292_residues MSNLPFHQFCGTEGYVASRALQDVVNVAIALERPLLLKGEPGTGKTLLAYHIAKALGMEIILWNVKSTTKARDGLYTYDT VQRLNDARFGDGDVRDIRHYIKLGPLGRAFGSAERVVLLIDEVDKADIEFPNDLLFELDEMRFHVLETDEWVSAAHRPVV IVTSNSEKELPDAFLRRCVFHYIDFPDETQMRAIIDVHFPDLPAELMRSACKVFYGLREVPGLRKRPSTSELLDWIRVLL ASGARLPEEETPALQSVPFLGALVKIQEDADILAHHASRSADVRTAGRRFFR >Mature_291_residues SNLPFHQFCGTEGYVASRALQDVVNVAIALERPLLLKGEPGTGKTLLAYHIAKALGMEIILWNVKSTTKARDGLYTYDTV QRLNDARFGDGDVRDIRHYIKLGPLGRAFGSAERVVLLIDEVDKADIEFPNDLLFELDEMRFHVLETDEWVSAAHRPVVI VTSNSEKELPDAFLRRCVFHYIDFPDETQMRAIIDVHFPDLPAELMRSACKVFYGLREVPGLRKRPSTSELLDWIRVLLA SGARLPEEETPALQSVPFLGALVKIQEDADILAHHASRSADVRTAGRRFFR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32955; Mature: 32824
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLPFHQFCGTEGYVASRALQDVVNVAIALERPLLLKGEPGTGKTLLAYHIAKALGMEI CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEE ILWNVKSTTKARDGLYTYDTVQRLNDARFGDGDVRDIRHYIKLGPLGRAFGSAERVVLLI EEEECCCCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEE DEVDKADIEFPNDLLFELDEMRFHVLETDEWVSAAHRPVVIVTSNSEKELPDAFLRRCVF ECCCCCCCCCCHHHHHHHHHHHEEEECCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH HYIDFPDETQMRAIIDVHFPDLPAELMRSACKVFYGLREVPGLRKRPSTSELLDWIRVLL HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ASGARLPEEETPALQSVPFLGALVKIQEDADILAHHASRSADVRTAGRRFFR HCCCCCCCCCCCHHHHCCHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure SNLPFHQFCGTEGYVASRALQDVVNVAIALERPLLLKGEPGTGKTLLAYHIAKALGMEI CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEE ILWNVKSTTKARDGLYTYDTVQRLNDARFGDGDVRDIRHYIKLGPLGRAFGSAERVVLLI EEEECCCCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEE DEVDKADIEFPNDLLFELDEMRFHVLETDEWVSAAHRPVVIVTSNSEKELPDAFLRRCVF ECCCCCCCCCCHHHHHHHHHHHEEEECCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH HYIDFPDETQMRAIIDVHFPDLPAELMRSACKVFYGLREVPGLRKRPSTSELLDWIRVLL HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ASGARLPEEETPALQSVPFLGALVKIQEDADILAHHASRSADVRTAGRRFFR HCCCCCCCCCCCHHHHCCHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA