| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ywiE [H]
Identifier: 78221292
GI number: 78221292
Start: 79368
End: 80801
Strand: Reverse
Name: ywiE [H]
Synonym: Gmet_0065
Alternate gene names: 78221292
Gene position: 80801-79368 (Counterclockwise)
Preceding gene: 78221297
Following gene: 78221289
Centisome position: 2.02
GC content: 64.5
Gene sequence:
>1434_bases GTGATCGACGAACTGGCCTTAGCACTGGGAACAGCGGCCCTCATTGCCCTCTCGCTCTTTTCGGCAGGGCACGCCTTGAT CATGAAGCGCGATCCCCGTTCCTCCCTGGGGTGGATCGTCACCTGCCTCACCATCCCCCTGCTCGGCCCCTTTTTTTACT GGGGGATGGGGGTCAACCGGATCTTCCGCCGCGCCCGTACATGGCTCGAAAGTGGCCGTCGCCTGGCCGACCCCGAGTTC TTCAAATCGACCCTCGAACAGAACACCGCCACGGCCCTCCCCCCCGGCGCCGAGTACCTGAGCGAGCTCCGCCGTCTGGC CGACCGGGTGGTGAGCACTCCCCTCGTGACGGGAAATCGGTTCACCCCCCTGGTAAACGGCGAAGGTGCCTATCCTGCCA TGCTCGAAGCCATCGCCGGCGCCCGCCGGTCGATCCACCTCTCCACCTACATCTTCGACTCGGACGCCGCGGGTCGCCGC TTCATCGATGCCCTGGCCGACGCCGCGAGGCGGGGGGTCGACGTGCGGGTCATCATCGACGGCCTCGGCGAAAAGTATTC CTTCCCCCGTGCCCGAACGCTCATGGAGAGGACCGGCATCCGGGTCGCCCGCTTCCTGCCGTTGAGGCAGGGGTTTTACA TGAATCTGCGCAACCACAGGAAAATGCTGATTATAGACGGGGAACGGGCGTTCACGGGAGGGATGAACATCGGTGACCGC CACATGGTGGAGCGGCCGCTCCCGACGGTGGTGAAGGATCTGCACTTTGCCGTCGCAGGGCCGGTGGTGGGCGAGCTTCA ACAGATCTTCCTGGAAGACTGGTACTTCGTTTCCGGAGAGCTCCTGGACAACCGGCACCACTTCCCCCCCCTCCCCGCGG CGGGGCACGCCATATCCCGGGCCATCGGCGACGGCCCCGACAAGGAGTTCCGCAAGCTCTTCCTGATCCTCATGGGGGCA CTCTCCTGCGCCACCCGGCAGGTGCAGATCATGACCCCCTATTTCATTCCCGACCGGGCACTGGTGGCAGCCCTTGTCAC CACTGCCCTGCGTGGCGTGGAAGTGACTCTCGTCCTCCCCGAGAAGAACAACCTTCCCTTTGTCCACTGGGCCTCCCGGG CCTACCTCTGGGAGCTCCTCCAGCAGGGGATCCGGGTCTTCTACCAACCTCCCCCCTTCGTCCACACCAAGCTCTTCATT GTGGACGGCCTCTGGAGCCTCATCGGCTCCGCCAATCTCGATCCCCGCAGCCTCCGCCTCAACTTCGAGCTGAACCTGGA GGTCTATGACCGGGAATTCGCCGGAACCCTGACCAAGCATGTAGCCGGCGTGCTGGCCCGGTCCCGCGAGGTAACCCTCG AGCAAATGGACAACCGCCCCCTGCCGGAAAAGCTGCGGGACGGGGTGGCCAAGCTCTTCTCCCCCTATCTGTAG
Upstream 100 bases:
>100_bases GCTTCGGCCTGCTGCTTGACTTGACCGGACGGTGAGCTAACCTTGACGTGTGCCGGCCGACCCGCCGCGGTTTTTGTGCA TCTTGTTATGGAGAGGTGAT
Downstream 100 bases:
>100_bases CCCTCCACAGAAATCCATGAAAAAGCCCGCTTGCGCGGGCCATGGTCACGTGCGGTATTTCTCGATGGCGACCAGCGCCC GGTCGAGGGCGTCGCGGCAA
Product: cardiolipin synthetase 2
Products: NA
Alternate protein names: CL synthase 1 [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MIDELALALGTAALIALSLFSAGHALIMKRDPRSSLGWIVTCLTIPLLGPFFYWGMGVNRIFRRARTWLESGRRLADPEF FKSTLEQNTATALPPGAEYLSELRRLADRVVSTPLVTGNRFTPLVNGEGAYPAMLEAIAGARRSIHLSTYIFDSDAAGRR FIDALADAARRGVDVRVIIDGLGEKYSFPRARTLMERTGIRVARFLPLRQGFYMNLRNHRKMLIIDGERAFTGGMNIGDR HMVERPLPTVVKDLHFAVAGPVVGELQQIFLEDWYFVSGELLDNRHHFPPLPAAGHAISRAIGDGPDKEFRKLFLILMGA LSCATRQVQIMTPYFIPDRALVAALVTTALRGVEVTLVLPEKNNLPFVHWASRAYLWELLQQGIRVFYQPPPFVHTKLFI VDGLWSLIGSANLDPRSLRLNFELNLEVYDREFAGTLTKHVAGVLARSREVTLEQMDNRPLPEKLRDGVAKLFSPYL
Sequences:
>Translated_477_residues MIDELALALGTAALIALSLFSAGHALIMKRDPRSSLGWIVTCLTIPLLGPFFYWGMGVNRIFRRARTWLESGRRLADPEF FKSTLEQNTATALPPGAEYLSELRRLADRVVSTPLVTGNRFTPLVNGEGAYPAMLEAIAGARRSIHLSTYIFDSDAAGRR FIDALADAARRGVDVRVIIDGLGEKYSFPRARTLMERTGIRVARFLPLRQGFYMNLRNHRKMLIIDGERAFTGGMNIGDR HMVERPLPTVVKDLHFAVAGPVVGELQQIFLEDWYFVSGELLDNRHHFPPLPAAGHAISRAIGDGPDKEFRKLFLILMGA LSCATRQVQIMTPYFIPDRALVAALVTTALRGVEVTLVLPEKNNLPFVHWASRAYLWELLQQGIRVFYQPPPFVHTKLFI VDGLWSLIGSANLDPRSLRLNFELNLEVYDREFAGTLTKHVAGVLARSREVTLEQMDNRPLPEKLRDGVAKLFSPYL >Mature_477_residues MIDELALALGTAALIALSLFSAGHALIMKRDPRSSLGWIVTCLTIPLLGPFFYWGMGVNRIFRRARTWLESGRRLADPEF FKSTLEQNTATALPPGAEYLSELRRLADRVVSTPLVTGNRFTPLVNGEGAYPAMLEAIAGARRSIHLSTYIFDSDAAGRR FIDALADAARRGVDVRVIIDGLGEKYSFPRARTLMERTGIRVARFLPLRQGFYMNLRNHRKMLIIDGERAFTGGMNIGDR HMVERPLPTVVKDLHFAVAGPVVGELQQIFLEDWYFVSGELLDNRHHFPPLPAAGHAISRAIGDGPDKEFRKLFLILMGA LSCATRQVQIMTPYFIPDRALVAALVTTALRGVEVTLVLPEKNNLPFVHWASRAYLWELLQQGIRVFYQPPPFVHTKLFI VDGLWSLIGSANLDPRSLRLNFELNLEVYDREFAGTLTKHVAGVLARSREVTLEQMDNRPLPEKLRDGVAKLFSPYL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=474, Percent_Identity=31.6455696202532, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1787007, Length=361, Percent_Identity=31.3019390581717, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI87081826, Length=394, Percent_Identity=26.3959390862944, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 53502; Mature: 53502
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDELALALGTAALIALSLFSAGHALIMKRDPRSSLGWIVTCLTIPLLGPFFYWGMGVNR CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH IFRRARTWLESGRRLADPEFFKSTLEQNTATALPPGAEYLSELRRLADRVVSTPLVTGNR HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FTPLVNGEGAYPAMLEAIAGARRSIHLSTYIFDSDAAGRRFIDALADAARRGVDVRVIID CCCEECCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEE GLGEKYSFPRARTLMERTGIRVARFLPLRQGFYMNLRNHRKMLIIDGERAFTGGMNIGDR CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCEEEEEECCEEEECCCCCCCH HMVERPLPTVVKDLHFAVAGPVVGELQQIFLEDWYFVSGELLDNRHHFPPLPAAGHAISR HHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHH AIGDGPDKEFRKLFLILMGALSCATRQVQIMTPYFIPDRALVAALVTTALRGVEVTLVLP HHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCEECCHHHHHHHHHHHHHCCEEEEEEEE EKNNLPFVHWASRAYLWELLQQGIRVFYQPPPFVHTKLFIVDGLWSLIGSANLDPRSLRL CCCCCCEEEEHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE NFELNLEVYDREFAGTLTKHVAGVLARSREVTLEQMDNRPLPEKLRDGVAKLFSPYL EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MIDELALALGTAALIALSLFSAGHALIMKRDPRSSLGWIVTCLTIPLLGPFFYWGMGVNR CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH IFRRARTWLESGRRLADPEFFKSTLEQNTATALPPGAEYLSELRRLADRVVSTPLVTGNR HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FTPLVNGEGAYPAMLEAIAGARRSIHLSTYIFDSDAAGRRFIDALADAARRGVDVRVIID CCCEECCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEE GLGEKYSFPRARTLMERTGIRVARFLPLRQGFYMNLRNHRKMLIIDGERAFTGGMNIGDR CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCEEEEEECCEEEECCCCCCCH HMVERPLPTVVKDLHFAVAGPVVGELQQIFLEDWYFVSGELLDNRHHFPPLPAAGHAISR HHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHH AIGDGPDKEFRKLFLILMGALSCATRQVQIMTPYFIPDRALVAALVTTALRGVEVTLVLP HHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCEECCHHHHHHHHHHHHHCCEEEEEEEE EKNNLPFVHWASRAYLWELLQQGIRVFYQPPPFVHTKLFIVDGLWSLIGSANLDPRSLRL CCCCCCEEEEHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE NFELNLEVYDREFAGTLTKHVAGVLARSREVTLEQMDNRPLPEKLRDGVAKLFSPYL EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8846791; 9353933; 9384377 [H]