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The map label for this gene is 78221291

Identifier: 78221291

GI number: 78221291

Start: 78552

End: 79322

Strand: Direct

Name: 78221291

Synonym: Gmet_0064

Alternate gene names: NA

Gene position: 78552-79322 (Clockwise)

Preceding gene: 78221290

Following gene: 78221293

Centisome position: 1.97

GC content: 62.39

Gene sequence:

>771_bases
ATGTCTAATTGCGTCTATGCCCACGTCCCCTATTCGATGCTGGCGGCAAACCTGCCAGCCATTATCTCCCGGCGTATCAA
CCCGGAGATATTTTTTTCCGGCGATACCCTCGATACCCTCGTCCCCGAGGAAGTGGGCGCAATCGCCGGGCAGCTGGCCG
AGGCGGGGCTCCGCTGTACCTTCCACGGGGCCTTTATCGACCTGAATCCCGGGTCGGTGGAGCGCCTCATCCGCGAGGCG
ACCATGCACCGCTTCGGGCAGGTGCTGGATGCGGCGCAAATCCTCAAACCCGACGTCATCGTCTTCCATCCGGGATACGA
CAAGTGGCGCTATGGTGAGAGCCAGGACAAGTGGCTTGCCCACAGCATTGTCGCGTGGCGGCAGGTGCTTGAGCGGACCG
ACTCCCTCGGCACCACCATCGCAGTGGAGAACATCTTCGAGGAGGAGCCGTCGACCCTGAAGGCGCTTTTTGAGGCAATC
GACCACCCCCGTCTGCGGCACTGCTTCGACGTGGGGCACTGGAACCTGTTCCACACCGTGGGGATGGAGGAGTGGTTCGC
CGAACTGGGCTCTTTCGTGGCCGAGGCCCATATCCACGACAATTTCGGCAAACGGGATGACCACCTACCCCTTGGGGAGG
CAGCCATCGACTTTGACCTCTTTTTCTCCCTCATGGAGCGTTACGCCCCCGGCGCCGCGTGGACCATCGAGGCCCATTGC
CGCGACGCCCTCGACCGGGCGCTGGTCGCCATCGAGAAATACCGCACGTGA

Upstream 100 bases:

>100_bases
CTCGGCGAACCGGTGGCTATTACAAAGCTGGAGCAACTGGTCGCCTGCGAATCGTGCGCCGATACGATCATCAAAAAACA
CCGAAAAGAGCACCCCGATC

Downstream 100 bases:

>100_bases
CCATGGCCCGCGCAAGCGGGCTTTTTCATGGATTTCTGTGGAGGGCTACAGATAGGGGGAGAAGAGCTTGGCCACCCCGT
CCCGCAGCTTTTCCGGCAGG

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSNCVYAHVPYSMLAANLPAIISRRINPEIFFSGDTLDTLVPEEVGAIAGQLAEAGLRCTFHGAFIDLNPGSVERLIREA
TMHRFGQVLDAAQILKPDVIVFHPGYDKWRYGESQDKWLAHSIVAWRQVLERTDSLGTTIAVENIFEEEPSTLKALFEAI
DHPRLRHCFDVGHWNLFHTVGMEEWFAELGSFVAEAHIHDNFGKRDDHLPLGEAAIDFDLFFSLMERYAPGAAWTIEAHC
RDALDRALVAIEKYRT

Sequences:

>Translated_256_residues
MSNCVYAHVPYSMLAANLPAIISRRINPEIFFSGDTLDTLVPEEVGAIAGQLAEAGLRCTFHGAFIDLNPGSVERLIREA
TMHRFGQVLDAAQILKPDVIVFHPGYDKWRYGESQDKWLAHSIVAWRQVLERTDSLGTTIAVENIFEEEPSTLKALFEAI
DHPRLRHCFDVGHWNLFHTVGMEEWFAELGSFVAEAHIHDNFGKRDDHLPLGEAAIDFDLFFSLMERYAPGAAWTIEAHC
RDALDRALVAIEKYRT
>Mature_255_residues
SNCVYAHVPYSMLAANLPAIISRRINPEIFFSGDTLDTLVPEEVGAIAGQLAEAGLRCTFHGAFIDLNPGSVERLIREAT
MHRFGQVLDAAQILKPDVIVFHPGYDKWRYGESQDKWLAHSIVAWRQVLERTDSLGTTIAVENIFEEEPSTLKALFEAID
HPRLRHCFDVGHWNLFHTVGMEEWFAELGSFVAEAHIHDNFGKRDDHLPLGEAAIDFDLFFSLMERYAPGAAWTIEAHCR
DALDRALVAIEKYRT

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 28935; Mature: 28804

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNCVYAHVPYSMLAANLPAIISRRINPEIFFSGDTLDTLVPEEVGAIAGQLAEAGLRCT
CCCCEEEECCHHHHHHCHHHHHHHCCCCEEEECCCCHHHHCHHHHHHHHHHHHHCCCEEE
FHGAFIDLNPGSVERLIREATMHRFGQVLDAAQILKPDVIVFHPGYDKWRYGESQDKWLA
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHH
HSIVAWRQVLERTDSLGTTIAVENIFEEEPSTLKALFEAIDHPRLRHCFDVGHWNLFHTV
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHC
GMEEWFAELGSFVAEAHIHDNFGKRDDHLPLGEAAIDFDLFFSLMERYAPGAAWTIEAHC
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHH
RDALDRALVAIEKYRT
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNCVYAHVPYSMLAANLPAIISRRINPEIFFSGDTLDTLVPEEVGAIAGQLAEAGLRCT
CCCEEEECCHHHHHHCHHHHHHHCCCCEEEECCCCHHHHCHHHHHHHHHHHHHCCCEEE
FHGAFIDLNPGSVERLIREATMHRFGQVLDAAQILKPDVIVFHPGYDKWRYGESQDKWLA
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHH
HSIVAWRQVLERTDSLGTTIAVENIFEEEPSTLKALFEAIDHPRLRHCFDVGHWNLFHTV
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHC
GMEEWFAELGSFVAEAHIHDNFGKRDDHLPLGEAAIDFDLFFSLMERYAPGAAWTIEAHC
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHH
RDALDRALVAIEKYRT
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]