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The map label for this gene is 78221251

Identifier: 78221251

GI number: 78221251

Start: 30345

End: 31571

Strand: Direct

Name: 78221251

Synonym: Gmet_0023

Alternate gene names: NA

Gene position: 30345-31571 (Clockwise)

Preceding gene: 78221250

Following gene: 78221253

Centisome position: 0.76

GC content: 61.53

Gene sequence:

>1227_bases
ATGTCCTGGTTTGCCAACCTGAAGATCAGCACGAAGTTCAACATCATCCTGTCGCTCCTTCTGGTGTTCGTCTTCCTGGC
GGCGGCCTTCTTCGTCTACCATCGGGAAAGGGCGCTCATCGACCGAATCGCCGTGGACAACGCCCGGAGCATTGCCCGGC
AGATCATCGAGACCCGTGACTACATCTCCAGCGTGGTAAAGGGGGAGCCCAACGAGAACTACAACCTGGTTCCCCAGGTG
GTGGCCACCAACGTGGCCAAGCGGCTGACCAGGGGGAGCGACTACTATGTGCGGCAGGTTTCGCTCCGGTACCGCAACCC
CGACAATCGCCCCGATCCGTACGAGGAAGAGATGCTCAAGCTCTTCGCGGCAAAGAAGAGCACGGAAACCTACCGCATCG
TCCGGACCGACAAGGAGCAGAGCTTTCGCTACATGCTCTCGATGGTGGCGGAGAAGAGCTGCCTCGAATGCCACGGCCGC
TACGAGGATGCGCCACCCTTTGTCCGGGCCCGCTTCCCCAAGGGGCACTTCTCCTACAACTACCAGGTCGGCGAGGTGAT
CGGCGCCGTGTCGGTCTCGATCCCCCTGGCCGACCTCTATCGCGAGGCCGGGACCGACTTCAGACTCGATCTGGCCACCC
GGGGGCTCACCTTCTGTCTCATCATTTTCGTGATGGGATTCCTTGTCCGGCGCGCCATCATTGACCCGCTCCGGCAGGTT
TCCGCCTCCATCACCCATGTCGCTGCCACCGGCAGTTTCGGCGACCGGATTCCCCAGCGCTCCCGGGACGAGATCGGCGA
ACTCGTGGCCGCCTTCAACGGCATGATGGAGGAGTTGGACCTCAAGACCCGCCAACGGCTAGAGTCCGAGGACCGCTACC
GCAATGTCCTGGAGATGGCCCAGTCGGCCATTGTCACCTTCCTGGCCGACGGCAAACTCATCATCACCAATCGTCGCGCT
GAGGACCTCTTCGGGCTGCCCAAAGGTGAACTCCTCGGGGCATCGATCTACACCTTCCTGGCCGACGGCGACGGGGTGCG
GGAGGGGATCTCGGCATACCTGCGCGACGGGACGGGGGGATTGGTTGGTGAGACGACTTCCCGGAAAATACGGGACATCA
GGGGGAGGATAACCGAGGTTGAGATGGCCCTCTCCGTTTCACGGTCGGACCATAATCCCCTCTTTACGGCAATCCTGAGG
GAGCACAACCAACACTCGGTCTACTGA

Upstream 100 bases:

>100_bases
CGACAAGCGGGAGATCGCGAAGAACTATGTCTGGTGACCCTCCTTGTCGAGGGCGGCCGGACGGGTATACTTGAAGCAAT
GTTAATGGCCGGAGGCACGC

Downstream 100 bases:

>100_bases
AAAAGTTTCGGCACAAAAAGAGGGGGAACGCTTGATGCGCTCCCCCTCTATTGATAATCCCTCCACCATGCCGTTGGCTT
GTAAGGGCCTCACAGCGAGT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Two-Component Sensor Histidine Kinase; Sensor Protein; Sensor Histidine Kinase; Sensor With HAMP Domain Protein; Chemotaxis Sensory Transducer; Diguanylate Cyclase/Phosphodiesterase; Sensor With HAMP Domain; Two-Component System Sensory/Regulatory Protein; Metal Dependent Phosphohydrolase; Hpt Sensor Hybrid Histidine Kinase; Sensory Box Protein; Diguanylate Cyclase; Mcp-Domain Signal Transduction Protein; Sensor Histidine Kinase/Response Regulator; Methyl-Accepting Chemotaxis Sensory Transducer; PasGgdef; Methyl-Accepting Chemotaxis Protein

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSWFANLKISTKFNIILSLLLVFVFLAAAFFVYHRERALIDRIAVDNARSIARQIIETRDYISSVVKGEPNENYNLVPQV
VATNVAKRLTRGSDYYVRQVSLRYRNPDNRPDPYEEEMLKLFAAKKSTETYRIVRTDKEQSFRYMLSMVAEKSCLECHGR
YEDAPPFVRARFPKGHFSYNYQVGEVIGAVSVSIPLADLYREAGTDFRLDLATRGLTFCLIIFVMGFLVRRAIIDPLRQV
SASITHVAATGSFGDRIPQRSRDEIGELVAAFNGMMEELDLKTRQRLESEDRYRNVLEMAQSAIVTFLADGKLIITNRRA
EDLFGLPKGELLGASIYTFLADGDGVREGISAYLRDGTGGLVGETTSRKIRDIRGRITEVEMALSVSRSDHNPLFTAILR
EHNQHSVY

Sequences:

>Translated_408_residues
MSWFANLKISTKFNIILSLLLVFVFLAAAFFVYHRERALIDRIAVDNARSIARQIIETRDYISSVVKGEPNENYNLVPQV
VATNVAKRLTRGSDYYVRQVSLRYRNPDNRPDPYEEEMLKLFAAKKSTETYRIVRTDKEQSFRYMLSMVAEKSCLECHGR
YEDAPPFVRARFPKGHFSYNYQVGEVIGAVSVSIPLADLYREAGTDFRLDLATRGLTFCLIIFVMGFLVRRAIIDPLRQV
SASITHVAATGSFGDRIPQRSRDEIGELVAAFNGMMEELDLKTRQRLESEDRYRNVLEMAQSAIVTFLADGKLIITNRRA
EDLFGLPKGELLGASIYTFLADGDGVREGISAYLRDGTGGLVGETTSRKIRDIRGRITEVEMALSVSRSDHNPLFTAILR
EHNQHSVY
>Mature_407_residues
SWFANLKISTKFNIILSLLLVFVFLAAAFFVYHRERALIDRIAVDNARSIARQIIETRDYISSVVKGEPNENYNLVPQVV
ATNVAKRLTRGSDYYVRQVSLRYRNPDNRPDPYEEEMLKLFAAKKSTETYRIVRTDKEQSFRYMLSMVAEKSCLECHGRY
EDAPPFVRARFPKGHFSYNYQVGEVIGAVSVSIPLADLYREAGTDFRLDLATRGLTFCLIIFVMGFLVRRAIIDPLRQVS
ASITHVAATGSFGDRIPQRSRDEIGELVAAFNGMMEELDLKTRQRLESEDRYRNVLEMAQSAIVTFLADGKLIITNRRAE
DLFGLPKGELLGASIYTFLADGDGVREGISAYLRDGTGGLVGETTSRKIRDIRGRITEVEMALSVSRSDHNPLFTAILRE
HNQHSVY

Specific function: Unknown

COG id: COG2770

COG function: function code T; FOG: HAMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46295; Mature: 46163

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50885 HAMP ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFANLKISTKFNIILSLLLVFVFLAAAFFVYHRERALIDRIAVDNARSIARQIIETRD
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YISSVVKGEPNENYNLVPQVVATNVAKRLTRGSDYYVRQVSLRYRNPDNRPDPYEEEMLK
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHH
LFAAKKSTETYRIVRTDKEQSFRYMLSMVAEKSCLECHGRYEDAPPFVRARFPKGHFSYN
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEC
YQVGEVIGAVSVSIPLADLYREAGTDFRLDLATRGLTFCLIIFVMGFLVRRAIIDPLRQV
EEHHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASITHVAATGSFGDRIPQRSRDEIGELVAAFNGMMEELDLKTRQRLESEDRYRNVLEMA
HHHHHHHEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAIVTFLADGKLIITNRRAEDLFGLPKGELLGASIYTFLADGDGVREGISAYLRDGTGG
HHHHHHHHCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
LVGETTSRKIRDIRGRITEVEMALSVSRSDHNPLFTAILREHNQHSVY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SWFANLKISTKFNIILSLLLVFVFLAAAFFVYHRERALIDRIAVDNARSIARQIIETRD
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YISSVVKGEPNENYNLVPQVVATNVAKRLTRGSDYYVRQVSLRYRNPDNRPDPYEEEMLK
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHH
LFAAKKSTETYRIVRTDKEQSFRYMLSMVAEKSCLECHGRYEDAPPFVRARFPKGHFSYN
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEC
YQVGEVIGAVSVSIPLADLYREAGTDFRLDLATRGLTFCLIIFVMGFLVRRAIIDPLRQV
EEHHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASITHVAATGSFGDRIPQRSRDEIGELVAAFNGMMEELDLKTRQRLESEDRYRNVLEMA
HHHHHHHEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAIVTFLADGKLIITNRRAEDLFGLPKGELLGASIYTFLADGDGVREGISAYLRDGTGG
HHHHHHHHCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
LVGETTSRKIRDIRGRITEVEMALSVSRSDHNPLFTAILREHNQHSVY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA