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The map label for this gene is yfiS [H]

Identifier: 78189963

GI number: 78189963

Start: 2549248

End: 2550537

Strand: Reverse

Name: yfiS [H]

Synonym: Cag_2010

Alternate gene names: 78189963

Gene position: 2550537-2549248 (Counterclockwise)

Preceding gene: 78189965

Following gene: 78189962

Centisome position: 99.16

GC content: 46.9

Gene sequence:

>1290_bases
ATGACCCAACCACCCGACACTCCACCCTTCATGGATACTGAAAGCAGCTCGCCGCAAGGCAAGAGCGCCATAACTCGCTC
TCTCCTTAAAGCCTTTCCCGCCTTTGCCAACCCCGATTTTCGCCGCTACTTTCCCGGTCAAGTTATTTCAATGATTGGTA
CATGGATGCAAATGGTGGCGCAAGGGTGGTTGGTCTATGAATTAACGGGCTCCGCTTTTGATGTAGGAATGGCTGCCGCC
GCAACTACCTTTCCCACACTTTTTCTCTCCCTTTTTGGAGGCTTGCTCGTTGATCGCTATCCACGCCGAACCATCCTTTT
TTGGACACAATCGTCAGCCATGTTGCTTGCCTTTATTTTGGGCATAGTTACCATGACGGGCACGGTAACTATGGGCATTA
TTTTATTGCTCTCCTTTTTGTTGGGGTGCGTTAATGCCATTAACGTGCCTGCACTCCAAGCCTTTTTGAGTGAAATTGTG
CGGCGCGATCATCTCCCTTCGGCAATTGCCATGAACTCCGCTATCTACAATAGCTCACGAGTGATTGGACCAGCACTTGC
AGGGTGGCTTATTGCTTACAGTGGTGCAGGTATTGCCTTCATTGTTAATGGGTTTAGCTTTTTTGCAGTGCTCCTCTCCC
TTTTTACCATGAAAACTAAGCGCCGTGCCCCAACGGTTATTGAGAGCAATCCACTGCTTGCAATTCGTGAAGGCGTGCTT
TACGCTTGGAACCACAAACTCATTCGCCTCTGCATTTATTACATCGCTATTGTGTCGGTTTTTTCATGGGCGTATGTAAG
TATGTTGCCCGTTATTGCAAAACAGCGTTTTGGGATGGATGCCTCTGGCATGGGCTCGCTTTTTGGAATTTCGGGTATTG
GCTCGGTGATGGGTACTATTATGGTTTCTATGTTAGCCAATAAAATTCAGCCACTCCGTTTTATTGCAATAGGCTCCCTT
ATTTTTGCGGTGGCGCTACTTGGTTTTACGCTAACGGAGAATTTGCCATTAGCAATGGTTGGACTTTTTTTTGCAGGCTT
CGGATTGGTGGCAGCCGTCTCAACCTTAAGCGCCACCATTCAAGGTGCGGTTGAGGATCGTTTTCGAGGTAGGGTAATGA
GTTTGTATATGATGATTTTTATGGGTTTTATGCCACTCGGAAATGTTACCATTGGTTACCTTTCCGATTTGTTTGGAACA
GGTTTTGCAATTCAGCTCAATTGCATAGTAACCATTATAGCCGCACTACTTTTGCTTGTGCACAGCAAGCAGTTCCTCCG
TATTGGGTGA

Upstream 100 bases:

>100_bases
GCTTATTTTGGCAGCTTATGTAAAGTAAATGGATTTAATCTCACAGAGATACAGCAATCATAATGTCAATAATTACAGGG
GCTGTTGGGGAGCCACTCCC

Downstream 100 bases:

>100_bases
GAATGCGTGATGATGTGGTTTATTAACTAATGACTGTAACGCATCATTCTATAATAACTTGTATGATTTTCGTTTCTTTT
GTATTCCCATTATGAATTAT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTQPPDTPPFMDTESSSPQGKSAITRSLLKAFPAFANPDFRRYFPGQVISMIGTWMQMVAQGWLVYELTGSAFDVGMAAA
ATTFPTLFLSLFGGLLVDRYPRRTILFWTQSSAMLLAFILGIVTMTGTVTMGIILLLSFLLGCVNAINVPALQAFLSEIV
RRDHLPSAIAMNSAIYNSSRVIGPALAGWLIAYSGAGIAFIVNGFSFFAVLLSLFTMKTKRRAPTVIESNPLLAIREGVL
YAWNHKLIRLCIYYIAIVSVFSWAYVSMLPVIAKQRFGMDASGMGSLFGISGIGSVMGTIMVSMLANKIQPLRFIAIGSL
IFAVALLGFTLTENLPLAMVGLFFAGFGLVAAVSTLSATIQGAVEDRFRGRVMSLYMMIFMGFMPLGNVTIGYLSDLFGT
GFAIQLNCIVTIIAALLLLVHSKQFLRIG

Sequences:

>Translated_429_residues
MTQPPDTPPFMDTESSSPQGKSAITRSLLKAFPAFANPDFRRYFPGQVISMIGTWMQMVAQGWLVYELTGSAFDVGMAAA
ATTFPTLFLSLFGGLLVDRYPRRTILFWTQSSAMLLAFILGIVTMTGTVTMGIILLLSFLLGCVNAINVPALQAFLSEIV
RRDHLPSAIAMNSAIYNSSRVIGPALAGWLIAYSGAGIAFIVNGFSFFAVLLSLFTMKTKRRAPTVIESNPLLAIREGVL
YAWNHKLIRLCIYYIAIVSVFSWAYVSMLPVIAKQRFGMDASGMGSLFGISGIGSVMGTIMVSMLANKIQPLRFIAIGSL
IFAVALLGFTLTENLPLAMVGLFFAGFGLVAAVSTLSATIQGAVEDRFRGRVMSLYMMIFMGFMPLGNVTIGYLSDLFGT
GFAIQLNCIVTIIAALLLLVHSKQFLRIG
>Mature_428_residues
TQPPDTPPFMDTESSSPQGKSAITRSLLKAFPAFANPDFRRYFPGQVISMIGTWMQMVAQGWLVYELTGSAFDVGMAAAA
TTFPTLFLSLFGGLLVDRYPRRTILFWTQSSAMLLAFILGIVTMTGTVTMGIILLLSFLLGCVNAINVPALQAFLSEIVR
RDHLPSAIAMNSAIYNSSRVIGPALAGWLIAYSGAGIAFIVNGFSFFAVLLSLFTMKTKRRAPTVIESNPLLAIREGVLY
AWNHKLIRLCIYYIAIVSVFSWAYVSMLPVIAKQRFGMDASGMGSLFGISGIGSVMGTIMVSMLANKIQPLRFIAIGSLI
FAVALLGFTLTENLPLAMVGLFFAGFGLVAAVSTLSATIQGAVEDRFRGRVMSLYMMIFMGFMPLGNVTIGYLSDLFGTG
FAIQLNCIVTIIAALLLLVHSKQFLRIG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46480; Mature: 46349

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPDTPPFMDTESSSPQGKSAITRSLLKAFPAFANPDFRRYFPGQVISMIGTWMQMVA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
QGWLVYELTGSAFDVGMAAAATTFPTLFLSLFGGLLVDRYPRRTILFWTQSSAMLLAFIL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
GIVTMTGTVTMGIILLLSFLLGCVNAINVPALQAFLSEIVRRDHLPSAIAMNSAIYNSSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VIGPALAGWLIAYSGAGIAFIVNGFSFFAVLLSLFTMKTKRRAPTVIESNPLLAIREGVL
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHCCCH
YAWNHKLIRLCIYYIAIVSVFSWAYVSMLPVIAKQRFGMDASGMGSLFGISGIGSVMGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MVSMLANKIQPLRFIAIGSLIFAVALLGFTLTENLPLAMVGLFFAGFGLVAAVSTLSATI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QGAVEDRFRGRVMSLYMMIFMGFMPLGNVTIGYLSDLFGTGFAIQLNCIVTIIAALLLLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
HSKQFLRIG
CCHHHHCCC
>Mature Secondary Structure 
TQPPDTPPFMDTESSSPQGKSAITRSLLKAFPAFANPDFRRYFPGQVISMIGTWMQMVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
QGWLVYELTGSAFDVGMAAAATTFPTLFLSLFGGLLVDRYPRRTILFWTQSSAMLLAFIL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
GIVTMTGTVTMGIILLLSFLLGCVNAINVPALQAFLSEIVRRDHLPSAIAMNSAIYNSSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VIGPALAGWLIAYSGAGIAFIVNGFSFFAVLLSLFTMKTKRRAPTVIESNPLLAIREGVL
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHCCCH
YAWNHKLIRLCIYYIAIVSVFSWAYVSMLPVIAKQRFGMDASGMGSLFGISGIGSVMGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MVSMLANKIQPLRFIAIGSLIFAVALLGFTLTENLPLAMVGLFFAGFGLVAAVSTLSATI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QGAVEDRFRGRVMSLYMMIFMGFMPLGNVTIGYLSDLFGTGFAIQLNCIVTIIAALLLLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
HSKQFLRIG
CCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]