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The map label for this gene is 78189941

Identifier: 78189941

GI number: 78189941

Start: 2523442

End: 2524794

Strand: Reverse

Name: 78189941

Synonym: Cag_1988

Alternate gene names: NA

Gene position: 2524794-2523442 (Counterclockwise)

Preceding gene: 78189945

Following gene: 78189940

Centisome position: 98.16

GC content: 48.41

Gene sequence:

>1353_bases
ATGATGCAGTGGCATTGCAAGGCTTTTCTTATTTTGCGCCACTCTTTTAACGAACAGTGCAACCTTTTTATGCCCGAAAT
AAAACCCTTTTCAGGGGTGCTCTACCATCCTGAATTATTGAAGCAAGCAGACAAACTAATCTGCCCTCCTTACGATATTA
TCTCCTCAGCCCAGCAGCAATCGCTGTACCATCGTTCCCCACTGAATGCTATTCGCCTTGAATTGCCACTTGAGGAGAAT
CCTTACGGAACTGCCGCTGCACGTTTAACGCAATGGCTTCAGTCGGGCGAACTTCAGCGCGATAGTGAGCCGGCGATCTA
TCCTTACTTTCAAACTTTTGAGGATTTAGAGGGCAAGAGCCATGTGCGCCATGGATTTTTTACCGCAATGCGTTTGCATG
AGTTTTCGGAAAATAAGGTGCTACGCCACGAAAAAACCCTATCGGCACCAAAAGCTGATCGCTTGAACCTTTTTCGGGCA
ACGCGCACCAACATTAGTCCTATTTATGGCTTGTATGCCGATGAGCATCGCACGCTTGACCAACTTATGGTGGCGTACAG
CGAAACGCACGAGCCACTGCTTGATGCCAATGTGCAAGGCATACGCAATCGCTTGTGGCGCATTACTGAGCCTACGCTTT
TAGAGCAATTCCGCCAAACCTTGCTTAATCGCCAAGTTTACATTGCCGATGGGCACCATCGTTACGATACGGGCGTTACC
TACCGCAACGAGCGTATGGCAGCAAATCCTACCCATAATGGCAATGAGCCGTATAACTTTATTTTTAGCTGCCTTACCAA
TATTTACGATGAAGGCTTAATTGTTTTTCCGCTGCATCGCGTGCTGCATAGTGTGGCTGATTTTAATGCCGAGCGTCTTA
AAGAGCAGCTTGCGGAATTTTTTACCATTACTGACCTCAATAGCCAAGATGAATTGAAAGCCTATCTTGCGGCATCTACC
TCATCATTTAGTTATGGCGTGGTAACGAGTGGTGCGCTGTATGGTATGACGCTTAAAGGTGAAGCGGCACCGTTGCTTGA
TGCCCAGTGTGCCCATTGCCCCGAAGCGGTAGCGCAACTTGGTGTGGTGGTGTTGCATCAGGTGATTTTTCATAAGCTGC
TTGGCATTTCGCATGAAGCTATGGAAGCTCAGCGCAATTTGCTTTATGTTACCGATGTGAATGAGGTGTTTCATGCCGTT
GCCTGCCGCACCGCTCAAGCGGGCTTTGTGGTAAAGCCCACCACGGTGCAGCAAGTGCTTGACGTGTCGGAATCGGGCGA
GGTGATGCCGCAAAAGTCCACCTTCTTCTATCCAAAGCTTATGACGGGCTTGCTCTTTAACCCGCTTGATTAA

Upstream 100 bases:

>100_bases
GCTGCAATTGGGACGGCAAAGATACAAAATTCCCGAAAGGCTTTGCCATGCCATTTTCTATGTTATGTAAAAAGAGGCGT
GTTGTTTTGTGCCGTTAAAA

Downstream 100 bases:

>100_bases
CAAGAGGAAATGATGCGCGAAGAGTTTTTTTCCACCAGCGAGTCCGAAACGTTGCTGCTTGCTGAGCGCTTTGCTGCCGC
ACTACCACCGCGAAGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MMQWHCKAFLILRHSFNEQCNLFMPEIKPFSGVLYHPELLKQADKLICPPYDIISSAQQQSLYHRSPLNAIRLELPLEEN
PYGTAAARLTQWLQSGELQRDSEPAIYPYFQTFEDLEGKSHVRHGFFTAMRLHEFSENKVLRHEKTLSAPKADRLNLFRA
TRTNISPIYGLYADEHRTLDQLMVAYSETHEPLLDANVQGIRNRLWRITEPTLLEQFRQTLLNRQVYIADGHHRYDTGVT
YRNERMAANPTHNGNEPYNFIFSCLTNIYDEGLIVFPLHRVLHSVADFNAERLKEQLAEFFTITDLNSQDELKAYLAAST
SSFSYGVVTSGALYGMTLKGEAAPLLDAQCAHCPEAVAQLGVVVLHQVIFHKLLGISHEAMEAQRNLLYVTDVNEVFHAV
ACRTAQAGFVVKPTTVQQVLDVSESGEVMPQKSTFFYPKLMTGLLFNPLD

Sequences:

>Translated_450_residues
MMQWHCKAFLILRHSFNEQCNLFMPEIKPFSGVLYHPELLKQADKLICPPYDIISSAQQQSLYHRSPLNAIRLELPLEEN
PYGTAAARLTQWLQSGELQRDSEPAIYPYFQTFEDLEGKSHVRHGFFTAMRLHEFSENKVLRHEKTLSAPKADRLNLFRA
TRTNISPIYGLYADEHRTLDQLMVAYSETHEPLLDANVQGIRNRLWRITEPTLLEQFRQTLLNRQVYIADGHHRYDTGVT
YRNERMAANPTHNGNEPYNFIFSCLTNIYDEGLIVFPLHRVLHSVADFNAERLKEQLAEFFTITDLNSQDELKAYLAAST
SSFSYGVVTSGALYGMTLKGEAAPLLDAQCAHCPEAVAQLGVVVLHQVIFHKLLGISHEAMEAQRNLLYVTDVNEVFHAV
ACRTAQAGFVVKPTTVQQVLDVSESGEVMPQKSTFFYPKLMTGLLFNPLD
>Mature_450_residues
MMQWHCKAFLILRHSFNEQCNLFMPEIKPFSGVLYHPELLKQADKLICPPYDIISSAQQQSLYHRSPLNAIRLELPLEEN
PYGTAAARLTQWLQSGELQRDSEPAIYPYFQTFEDLEGKSHVRHGFFTAMRLHEFSENKVLRHEKTLSAPKADRLNLFRA
TRTNISPIYGLYADEHRTLDQLMVAYSETHEPLLDANVQGIRNRLWRITEPTLLEQFRQTLLNRQVYIADGHHRYDTGVT
YRNERMAANPTHNGNEPYNFIFSCLTNIYDEGLIVFPLHRVLHSVADFNAERLKEQLAEFFTITDLNSQDELKAYLAAST
SSFSYGVVTSGALYGMTLKGEAAPLLDAQCAHCPEAVAQLGVVVLHQVIFHKLLGISHEAMEAQRNLLYVTDVNEVFHAV
ACRTAQAGFVVKPTTVQQVLDVSESGEVMPQKSTFFYPKLMTGLLFNPLD

Specific function: Unknown

COG id: COG4198

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51309; Mature: 51309

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQWHCKAFLILRHSFNEQCNLFMPEIKPFSGVLYHPELLKQADKLICPPYDIISSAQQQ
CCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHH
SLYHRSPLNAIRLELPLEENPYGTAAARLTQWLQSGELQRDSEPAIYPYFQTFEDLEGKS
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCHH
HVRHGFFTAMRLHEFSENKVLRHEKTLSAPKADRLNLFRATRTNISPIYGLYADEHRTLD
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHH
QLMVAYSETHEPLLDANVQGIRNRLWRITEPTLLEQFRQTLLNRQVYIADGHHRYDTGVT
HHHHHHHHCCCCHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCEEECCCCE
YRNERMAANPTHNGNEPYNFIFSCLTNIYDEGLIVFPLHRVLHSVADFNAERLKEQLAEF
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHHHH
FTITDLNSQDELKAYLAASTSSFSYGVVTSGALYGMTLKGEAAPLLDAQCAHCPEAVAQL
HHHCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHCCHHHHHHH
GVVVLHQVIFHKLLGISHEAMEAQRNLLYVTDVNEVFHAVACRTAQAGFVVKPTTVQQVL
HHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCEEECCHHHHHHH
DVSESGEVMPQKSTFFYPKLMTGLLFNPLD
CCCCCCCCCCCCCCEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MMQWHCKAFLILRHSFNEQCNLFMPEIKPFSGVLYHPELLKQADKLICPPYDIISSAQQQ
CCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHH
SLYHRSPLNAIRLELPLEENPYGTAAARLTQWLQSGELQRDSEPAIYPYFQTFEDLEGKS
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCHH
HVRHGFFTAMRLHEFSENKVLRHEKTLSAPKADRLNLFRATRTNISPIYGLYADEHRTLD
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHH
QLMVAYSETHEPLLDANVQGIRNRLWRITEPTLLEQFRQTLLNRQVYIADGHHRYDTGVT
HHHHHHHHCCCCHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCEEECCCCE
YRNERMAANPTHNGNEPYNFIFSCLTNIYDEGLIVFPLHRVLHSVADFNAERLKEQLAEF
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHHHH
FTITDLNSQDELKAYLAASTSSFSYGVVTSGALYGMTLKGEAAPLLDAQCAHCPEAVAQL
HHHCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHCCHHHHHHH
GVVVLHQVIFHKLLGISHEAMEAQRNLLYVTDVNEVFHAVACRTAQAGFVVKPTTVQQVL
HHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCEEECCHHHHHHH
DVSESGEVMPQKSTFFYPKLMTGLLFNPLD
CCCCCCCCCCCCCCEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA