| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189919
Identifier: 78189919
GI number: 78189919
Start: 2496300
End: 2496995
Strand: Reverse
Name: 78189919
Synonym: Cag_1966
Alternate gene names: NA
Gene position: 2496995-2496300 (Counterclockwise)
Preceding gene: 78189920
Following gene: 78189918
Centisome position: 97.08
GC content: 42.53
Gene sequence:
>696_bases ATGCTTTACGAAGATACCGACAATGTAACGCCAAATGGCGGACAGGAATGTCCGCCCTCCTTTTCGCCCTCTTGTTTGCC ATTTTTAAATCCTGATTGTGAGATTGCTATGACGCATCATCGTTTGCCTCATTGGCAGCAGGGTGATGTATGGGTTTTTG TAACATGGCGTCTTGCGGATTCCTTGCCAAAGGTAACGTTAGATGAGTGGACAGAGACACGAAAAATATGGCTTTCACTT CATCCTGAACCATGGGATGAAAAAACAGAAAAGGAGTATCATCAACGTTTTTCGCTCCAAAGAGATGAATGGCTTGATCA AGGCTGTGGTTCTTGTTTACTAAAGGATACTGTGAATGCGAAGATTGTCGTTGATGCTTTGCTCCATTTTAATGGGCTGC GTTATCAGTTAGCATCGTTTGTGGTAATGCCAAATCATGTGCATGTATTGTTTCGTCCTTTTGGAAAGTATTCGTTATCG GAGATTGTAAAATCGTGGAAAGGGTTTACGGCTCGTGAAATTAATAAGCGGTTAGGAACGAAAGGAGTGCTTTGGCAGGA TGGTTATTGGGATCGTTTGATTCGTAACGAACGCCATTTTTTCAAAGTGGTGGCGTACATCAGGCATAACCCTATTAATG CAATACAAAAGGAGGGCGGACATTCTTGTCCGCCATTTCAATGCTTTGTAGAATAA
Upstream 100 bases:
>100_bases TTTCTAACCCGATACAATGCAATAAAGTCAATAGAAACTGCAATTATTGGAAGGAAATAGCTTTGTCTCATATCAGGAAA AACCATTCCCACGCTTCCCC
Downstream 100 bases:
>100_bases ACGGGACGTGTGTGCTTCCGTCCGTTTCACGCATTAGCGGTTTAGAAAACCCGCTTTCGTTTTAAGGAGCATCCCCGTTT CATCCTTTCTTATTAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLYEDTDNVTPNGGQECPPSFSPSCLPFLNPDCEIAMTHHRLPHWQQGDVWVFVTWRLADSLPKVTLDEWTETRKIWLSL HPEPWDEKTEKEYHQRFSLQRDEWLDQGCGSCLLKDTVNAKIVVDALLHFNGLRYQLASFVVMPNHVHVLFRPFGKYSLS EIVKSWKGFTAREINKRLGTKGVLWQDGYWDRLIRNERHFFKVVAYIRHNPINAIQKEGGHSCPPFQCFVE
Sequences:
>Translated_231_residues MLYEDTDNVTPNGGQECPPSFSPSCLPFLNPDCEIAMTHHRLPHWQQGDVWVFVTWRLADSLPKVTLDEWTETRKIWLSL HPEPWDEKTEKEYHQRFSLQRDEWLDQGCGSCLLKDTVNAKIVVDALLHFNGLRYQLASFVVMPNHVHVLFRPFGKYSLS EIVKSWKGFTAREINKRLGTKGVLWQDGYWDRLIRNERHFFKVVAYIRHNPINAIQKEGGHSCPPFQCFVE >Mature_231_residues MLYEDTDNVTPNGGQECPPSFSPSCLPFLNPDCEIAMTHHRLPHWQQGDVWVFVTWRLADSLPKVTLDEWTETRKIWLSL HPEPWDEKTEKEYHQRFSLQRDEWLDQGCGSCLLKDTVNAKIVVDALLHFNGLRYQLASFVVMPNHVHVLFRPFGKYSLS EIVKSWKGFTAREINKRLGTKGVLWQDGYWDRLIRNERHFFKVVAYIRHNPINAIQKEGGHSCPPFQCFVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27066; Mature: 27066
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYEDTDNVTPNGGQECPPSFSPSCLPFLNPDCEIAMTHHRLPHWQQGDVWVFVTWRLAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECC SLPKVTLDEWTETRKIWLSLHPEPWDEKTEKEYHQRFSLQRDEWLDQGCGSCLLKDTVNA CCCCCCHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEHHHCCCH KIVVDALLHFNGLRYQLASFVVMPNHVHVLFRPFGKYSLSEIVKSWKGFTAREINKRLGT HHHHHHHHHHCCHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCC KGVLWQDGYWDRLIRNERHFFKVVAYIRHNPINAIQKEGGHSCPPFQCFVE CCEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MLYEDTDNVTPNGGQECPPSFSPSCLPFLNPDCEIAMTHHRLPHWQQGDVWVFVTWRLAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECC SLPKVTLDEWTETRKIWLSLHPEPWDEKTEKEYHQRFSLQRDEWLDQGCGSCLLKDTVNA CCCCCCHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEHHHCCCH KIVVDALLHFNGLRYQLASFVVMPNHVHVLFRPFGKYSLSEIVKSWKGFTAREINKRLGT HHHHHHHHHHCCHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCC KGVLWQDGYWDRLIRNERHFFKVVAYIRHNPINAIQKEGGHSCPPFQCFVE CCEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA