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The map label for this gene is yrkE [H]

Identifier: 78189914

GI number: 78189914

Start: 2489384

End: 2489893

Strand: Reverse

Name: yrkE [H]

Synonym: Cag_1961

Alternate gene names: 78189914

Gene position: 2489893-2489384 (Counterclockwise)

Preceding gene: 78189915

Following gene: 78189913

Centisome position: 96.8

GC content: 42.16

Gene sequence:

>510_bases
ATGGCTGATACGAAAAAGCTTGCAATTATTGCATCGCAGGGCACTCTTGATTGGGCGTATCCTCCCTTTATTCTTGCTTC
TACGGCTGCTGCTATGGATATGGAAGCTGTTATTTTCTTCACTTTTTATGGCTTACCTCTCCTTAAAAAAGAGATTGATT
TAAAGGTTTCGCCACACACCAATCCTGCAATGCCAATGAAAATGCCGTTTGGCAGCAAGGAATTTCAAGGTGTTAATTGG
TCTATTCCCAACCTTATTTCGGGCAACGTACCCGGTTTCGATAACATGGCAACCATGCTGATGAAAGAGACCTTTAAAAA
GAAAGGGGTGGCAACTATCGAGCAACTTCGTAGCATGTGTCAAGAGTTTGGCGTGCGCTTTATTGCCTGCCAAATGACTA
TGGAGGTGTTTGGTTTTGAAAAAGATCAATTTATTGATGGTGTTGAATATGGTGGTGCAGCAACCTTTCTTGAGTATGCT
GCCGACGCCAATATTTCTCTCTTTATTTGA

Upstream 100 bases:

>100_bases
TGGGCACTAACTTGGCTCTCTTTTGGGTTGTAACGAGCTGCTTATAAGAGAGACGAACACTATTTTTTCGCTTCATTTTA
TAAAATAAGGAGAATCACTT

Downstream 100 bases:

>100_bases
TTTGCTGATTGCACATGATTCGTTATACCGATTTTGTTGCCCAATGCCTGCCGCACATTAAGGAGGTGCTCCCATGGGTT
CTTGTTGAGCGTATGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MADTKKLAIIASQGTLDWAYPPFILASTAAAMDMEAVIFFTFYGLPLLKKEIDLKVSPHTNPAMPMKMPFGSKEFQGVNW
SIPNLISGNVPGFDNMATMLMKETFKKKGVATIEQLRSMCQEFGVRFIACQMTMEVFGFEKDQFIDGVEYGGAATFLEYA
ADANISLFI

Sequences:

>Translated_169_residues
MADTKKLAIIASQGTLDWAYPPFILASTAAAMDMEAVIFFTFYGLPLLKKEIDLKVSPHTNPAMPMKMPFGSKEFQGVNW
SIPNLISGNVPGFDNMATMLMKETFKKKGVATIEQLRSMCQEFGVRFIACQMTMEVFGFEKDQFIDGVEYGGAATFLEYA
ADANISLFI
>Mature_168_residues
ADTKKLAIIASQGTLDWAYPPFILASTAAAMDMEAVIFFTFYGLPLLKKEIDLKVSPHTNPAMPMKMPFGSKEFQGVNWS
IPNLISGNVPGFDNMATMLMKETFKKKGVATIEQLRSMCQEFGVRFIACQMTMEVFGFEKDQFIDGVEYGGAATFLEYAA
DANISLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 18739; Mature: 18608

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTKKLAIIASQGTLDWAYPPFILASTAAAMDMEAVIFFTFYGLPLLKKEIDLKVSPHT
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCC
NPAMPMKMPFGSKEFQGVNWSIPNLISGNVPGFDNMATMLMKETFKKKGVATIEQLRSMC
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QEFGVRFIACQMTMEVFGFEKDQFIDGVEYGGAATFLEYAADANISLFI
HHHCCEEEHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
ADTKKLAIIASQGTLDWAYPPFILASTAAAMDMEAVIFFTFYGLPLLKKEIDLKVSPHT
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCC
NPAMPMKMPFGSKEFQGVNWSIPNLISGNVPGFDNMATMLMKETFKKKGVATIEQLRSMC
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QEFGVRFIACQMTMEVFGFEKDQFIDGVEYGGAATFLEYAADANISLFI
HHHCCEEEHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]