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The map label for this gene is dsrB [H]

Identifier: 78189908

GI number: 78189908

Start: 2484018

End: 2485109

Strand: Reverse

Name: dsrB [H]

Synonym: Cag_1955

Alternate gene names: 78189908

Gene position: 2485109-2484018 (Counterclockwise)

Preceding gene: 78189909

Following gene: 78189907

Centisome position: 96.62

GC content: 45.6

Gene sequence:

>1092_bases
ATGAATAGCACTATGAGCACTCCTGAACAAAAATGGAAAACCATAGAGTCGGGCCCCCATACCTATGAGGATGCCCTACA
TCCGGTTGTTAAAAAGAATTATGGTCAATGGCGTTATCACGAAATTCCAAAACCCGGTGTTTTAAAACATGTGGCTTGGA
GTGGTGATGCTATTTACACGGTTCGTGCAGGTACACCTCGTCAAGATACCGTTGATTTAGTTCGCCGCCTTTGCGCTATT
GCTGATAAGTATAGCGATGGCTTTCTCCGCTTTACCGTTCGTAACAACGTTGAATTCCTTACCCCAAATGAAGCCAACAT
TGAGCCAATGATTCAAGAGCTCGAAGCTATGGGCTTACCCGTTGGTGGTACAGGTAATTGCGTTTCATCTGTTTCGCATA
CACAAGGATGGCTGCATTGTGATATTCCCGCAACTGATGCTTCAGGTGTGGTAAAATCAATGATGGATACTCTTTACAAT
GAGTTCCGTCATATGGAGATGCCCAATAAAGTTCGTCTCTCCACCTCATGCTGCTCAATTAACTGCGGTGGTCAAGCCGA
CATTGCCGTTGTTGTTAAGCACACTCGCCCACCTCGTATTAATCATGACGTTCTTGCTACCATCTGTGAATTGCCAAAAG
CTGTAGCTCGCTGCCCTGTTGCTGCAATTCGTCCAACCGTTATTAATGGCAAACGTTCGTTAATGGTTGACGAAGCAAAA
TGTATTTGCTGCGGTGCTTGCTTTGGTGCTTGTCCTGCTATGGAAATTAACCATCCTGAGCATTCTAAATTTGCTGTTTG
GGTTGGTGGTAAAAACAGTAATGCCCGAAGCAAACCTTCAACCATGAGCATTGTTGCGCATAACTTGCCCAACAATCCAC
CTCGCTGGCCTGAAGTAACTGAAGTGCTTGGTAAAATTCTTACAGCCTACAAAAAAGGTGGTCGTCCGTGGGAGCGTGTT
GGTGAATGGATTAACCGCATTGGCTGGAAGCGCTTCTTTGAAGAAACAGGGCTTACCTTCGATGAGAACATGATTGATAG
CTACCGTCATGCTCGCACGACGTTCAATCAGTCAGCTCACGTTCGCTTTTAG

Upstream 100 bases:

>100_bases
TTCAAAGCAGAGTACTAAAGTTTTCTGCTTTTCTATCAAGCCATAAATTTATGCACTCCCAACTTAAGTATTCCTTGAAT
TGGGAGTAAACTTTAAGGAA

Downstream 100 bases:

>100_bases
CCACTAAAGAGGAGGGTAATTCATGAAGGTAGAATCAAATCCAATCCTTGATTTTGCAATAAACTACCAGTTTCCTCCTT
TTGAGGAGCTTACTGGTACT

Product: sulfite reductase, dissimilatory-type beta subunit

Products: NA

Alternate protein names: Hydrogensulfite reductase subunit beta [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNSTMSTPEQKWKTIESGPHTYEDALHPVVKKNYGQWRYHEIPKPGVLKHVAWSGDAIYTVRAGTPRQDTVDLVRRLCAI
ADKYSDGFLRFTVRNNVEFLTPNEANIEPMIQELEAMGLPVGGTGNCVSSVSHTQGWLHCDIPATDASGVVKSMMDTLYN
EFRHMEMPNKVRLSTSCCSINCGGQADIAVVVKHTRPPRINHDVLATICELPKAVARCPVAAIRPTVINGKRSLMVDEAK
CICCGACFGACPAMEINHPEHSKFAVWVGGKNSNARSKPSTMSIVAHNLPNNPPRWPEVTEVLGKILTAYKKGGRPWERV
GEWINRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF

Sequences:

>Translated_363_residues
MNSTMSTPEQKWKTIESGPHTYEDALHPVVKKNYGQWRYHEIPKPGVLKHVAWSGDAIYTVRAGTPRQDTVDLVRRLCAI
ADKYSDGFLRFTVRNNVEFLTPNEANIEPMIQELEAMGLPVGGTGNCVSSVSHTQGWLHCDIPATDASGVVKSMMDTLYN
EFRHMEMPNKVRLSTSCCSINCGGQADIAVVVKHTRPPRINHDVLATICELPKAVARCPVAAIRPTVINGKRSLMVDEAK
CICCGACFGACPAMEINHPEHSKFAVWVGGKNSNARSKPSTMSIVAHNLPNNPPRWPEVTEVLGKILTAYKKGGRPWERV
GEWINRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF
>Mature_363_residues
MNSTMSTPEQKWKTIESGPHTYEDALHPVVKKNYGQWRYHEIPKPGVLKHVAWSGDAIYTVRAGTPRQDTVDLVRRLCAI
ADKYSDGFLRFTVRNNVEFLTPNEANIEPMIQELEAMGLPVGGTGNCVSSVSHTQGWLHCDIPATDASGVVKSMMDTLYN
EFRHMEMPNKVRLSTSCCSINCGGQADIAVVVKHTRPPRINHDVLATICELPKAVARCPVAAIRPTVINGKRSLMVDEAK
CICCGACFGACPAMEINHPEHSKFAVWVGGKNSNARSKPSTMSIVAHNLPNNPPRWPEVTEVLGKILTAYKKGGRPWERV
GEWINRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF

Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration [H]

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Membrane. Note=Although the protein complex is found in the soluble fraction it may be membrane-associated in vivo [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011808
- InterPro:   IPR005117
- InterPro:   IPR006067 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 40560; Mature: 40560

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTMSTPEQKWKTIESGPHTYEDALHPVVKKNYGQWRYHEIPKPGVLKHVAWSGDAIYT
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCHHHEEEECCCEEEE
VRAGTPRQDTVDLVRRLCAIADKYSDGFLRFTVRNNVEFLTPNEANIEPMIQELEAMGLP
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCC
VGGTGNCVSSVSHTQGWLHCDIPATDASGVVKSMMDTLYNEFRHMEMPNKVRLSTSCCSI
CCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEE
NCGGQADIAVVVKHTRPPRINHDVLATICELPKAVARCPVAAIRPTVINGKRSLMVDEAK
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHEEECCCC
CICCGACFGACPAMEINHPEHSKFAVWVGGKNSNARSKPSTMSIVAHNLPNNPPRWPEVT
CEEEHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
EVLGKILTAYKKGGRPWERVGEWINRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
VRF
CCC
>Mature Secondary Structure
MNSTMSTPEQKWKTIESGPHTYEDALHPVVKKNYGQWRYHEIPKPGVLKHVAWSGDAIYT
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCHHHEEEECCCEEEE
VRAGTPRQDTVDLVRRLCAIADKYSDGFLRFTVRNNVEFLTPNEANIEPMIQELEAMGLP
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCC
VGGTGNCVSSVSHTQGWLHCDIPATDASGVVKSMMDTLYNEFRHMEMPNKVRLSTSCCSI
CCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEE
NCGGQADIAVVVKHTRPPRINHDVLATICELPKAVARCPVAAIRPTVINGKRSLMVDEAK
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHEEECCCC
CICCGACFGACPAMEINHPEHSKFAVWVGGKNSNARSKPSTMSIVAHNLPNNPPRWPEVT
CEEEHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
EVLGKILTAYKKGGRPWERVGEWINRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
VRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7691984; 9389475 [H]