Click here to switch to the map view.

The map label for this gene is 78189869

Identifier: 78189869

GI number: 78189869

Start: 2434242

End: 2435000

Strand: Reverse

Name: 78189869

Synonym: Cag_1916

Alternate gene names: NA

Gene position: 2435000-2434242 (Counterclockwise)

Preceding gene: 78189871

Following gene: 78189868

Centisome position: 94.67

GC content: 42.03

Gene sequence:

>759_bases
ATGACTACGCCAGCATATCCACCGACCCAGCGCGACGACTACGACAGCCCATGGAAAGAAGCTATTGAACTCTACTTCTC
CGAATTTATGGCATTGTATTTTCTGAAAGCTTACGCTGCTATTGATTGGTCAAAACCCTACCACTTTCTTGACCAAGAAC
TCCGCTCCATTTTACCGCAAGCTGAGAATGGCAAACGCATTGTAGATAAATTAGTGCAAGTGCACCTTTTGGATGGCAAA
GAGCGTTGTTTGTATATTCAGATTGAAGTACAGGGCAACCGAGAAAGTAATTTTGAGAAACGGATGTTTACCTGTAACTA
CCGTATTTTTGACAAGTATGGTAAACCAGTTGCGAGCTTTGTGATTCTTACTGATACTGATAGTAGTTGGCGCCCAACCT
CCTACAGCTATGAATTTGCGGGCAGCAAGATGGCATTGGAATTTCAAGTTGCAAAATTGCTGGATTTTGAGCCACGCATG
GAGGAACTACTCGCCTCCAACAATGCGTTTGCATTAGTAACAGCCGCACATTTGCTTACGCAGCAAACTCGTGAAAACTC
ACTTGATCGCCTTGATGCTAAAACACAACTGATACGTTTACTCTACAACAAGCAATGGCCTAAAGAACGAGTAAGAGAAC
TTTTTCGGGTTATTGACTGGTTTATGGAGCTTCCGAAAGAGTTAGAACAACAATTACAAACAGAGATTTATAACATAGAG
GAGGAACAAAAGATGAAGGGCACCTCTATTTATTTGTAA

Upstream 100 bases:

>100_bases
AGCCTCAGCAACCGACGTGTGAATTGACAACCATCCAAAATCCATAATTCAAAAATAAAAGCGTATATTAGGCGAGTATT
GAAATATAAATATACGCACT

Downstream 100 bases:

>100_bases
ATGATATATCTTTATAATTTATAATGAGTTAGCATCATGAGATGAGAACAATATTTCGTATTTTGAAGGAAATAATCTCA
TTAAGCCATTCTTATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTTPAYPPTQRDDYDSPWKEAIELYFSEFMALYFLKAYAAIDWSKPYHFLDQELRSILPQAENGKRIVDKLVQVHLLDGK
ERCLYIQIEVQGNRESNFEKRMFTCNYRIFDKYGKPVASFVILTDTDSSWRPTSYSYEFAGSKMALEFQVAKLLDFEPRM
EELLASNNAFALVTAAHLLTQQTRENSLDRLDAKTQLIRLLYNKQWPKERVRELFRVIDWFMELPKELEQQLQTEIYNIE
EEQKMKGTSIYL

Sequences:

>Translated_252_residues
MTTPAYPPTQRDDYDSPWKEAIELYFSEFMALYFLKAYAAIDWSKPYHFLDQELRSILPQAENGKRIVDKLVQVHLLDGK
ERCLYIQIEVQGNRESNFEKRMFTCNYRIFDKYGKPVASFVILTDTDSSWRPTSYSYEFAGSKMALEFQVAKLLDFEPRM
EELLASNNAFALVTAAHLLTQQTRENSLDRLDAKTQLIRLLYNKQWPKERVRELFRVIDWFMELPKELEQQLQTEIYNIE
EEQKMKGTSIYL
>Mature_251_residues
TTPAYPPTQRDDYDSPWKEAIELYFSEFMALYFLKAYAAIDWSKPYHFLDQELRSILPQAENGKRIVDKLVQVHLLDGKE
RCLYIQIEVQGNRESNFEKRMFTCNYRIFDKYGKPVASFVILTDTDSSWRPTSYSYEFAGSKMALEFQVAKLLDFEPRME
ELLASNNAFALVTAAHLLTQQTRENSLDRLDAKTQLIRLLYNKQWPKERVRELFRVIDWFMELPKELEQQLQTEIYNIEE
EQKMKGTSIYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29907; Mature: 29776

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPAYPPTQRDDYDSPWKEAIELYFSEFMALYFLKAYAAIDWSKPYHFLDQELRSILPQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRESNFEKRMFTCNYRIFDKYGKPVASF
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHEEECHHHHHHHCCCEEEE
VILTDTDSSWRPTSYSYEFAGSKMALEFQVAKLLDFEPRMEELLASNNAFALVTAAHLLT
EEEECCCCCCCCCCCEEEECCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
QQTRENSLDRLDAKTQLIRLLYNKQWPKERVRELFRVIDWFMELPKELEQQLQTEIYNIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEQKMKGTSIYL
HHHHCCCCCCCC
>Mature Secondary Structure 
TTPAYPPTQRDDYDSPWKEAIELYFSEFMALYFLKAYAAIDWSKPYHFLDQELRSILPQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRESNFEKRMFTCNYRIFDKYGKPVASF
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHEEECHHHHHHHCCCEEEE
VILTDTDSSWRPTSYSYEFAGSKMALEFQVAKLLDFEPRMEELLASNNAFALVTAAHLLT
EEEECCCCCCCCCCCEEEECCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
QQTRENSLDRLDAKTQLIRLLYNKQWPKERVRELFRVIDWFMELPKELEQQLQTEIYNIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEQKMKGTSIYL
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA