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The map label for this gene is csmI [H]

Identifier: 78189834

GI number: 78189834

Start: 2388232

End: 2388720

Strand: Reverse

Name: csmI [H]

Synonym: Cag_1879

Alternate gene names: 78189834

Gene position: 2388720-2388232 (Counterclockwise)

Preceding gene: 78189837

Following gene: 78189833

Centisome position: 92.87

GC content: 42.74

Gene sequence:

>489_bases
ATGAAAATTACTATTAATAACAACAGTTACGAGGCTTCTGTAGGGCAACGCATTCTTGATGTTGCACGAGTTCATCACGA
GCATATTGGTTACTTTTGTGGCGGTAACGGCATGTGCCAAACCTGTTATATTACCGTACTTGAAGGAATGGAGAACCTTA
CTCCGTTGAGTCGCGAAGAAAAAGCTCTACTTTCCGACACACTTATCAGCGAAAACACACGCATGGCCTGCCAAACCTAC
CTTGAAAAAGAGGGCACCATTCGCATTAAATCTTTCGTGGAAGATGTAAAAGATATGTTTGAACAAAACCCTACAGCTCT
TGTAGGTTATGCAGGAAAAATGGGGTGGGAAGCGCTTGTGAAGTTTCCTGACACCATCACGTTGCAATCACAACGCGAAT
GGCATCTCATGCAATTTATTTCAGACGTGTTGAACGGTATTGGTGATGCCTTTTTAATGGTCAGCAAAGCGTGTGGCAAA
AAGGTATAA

Upstream 100 bases:

>100_bases
GGAACCAATAGCCAACATCTGCCGTTAGCCCTAAAACTTCGGTAAAAAGTTAGTCCTCCGCAATGTCTTATTTTTTAATC
ATTCCACTCTTTTGCTTCTC

Downstream 100 bases:

>100_bases
TTGCCTGAATTTTTATGTTTGCTAAAGGCTTGATAGCTTATAAATATCAAGCCTTTAGCATCACTCTAATAGTTAATTCC
CCATGGCTATTGAATACTCT

Product: chlorosome envelope protein X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKITINNNSYEASVGQRILDVARVHHEHIGYFCGGNGMCQTCYITVLEGMENLTPLSREEKALLSDTLISENTRMACQTY
LEKEGTIRIKSFVEDVKDMFEQNPTALVGYAGKMGWEALVKFPDTITLQSQREWHLMQFISDVLNGIGDAFLMVSKACGK
KV

Sequences:

>Translated_162_residues
MKITINNNSYEASVGQRILDVARVHHEHIGYFCGGNGMCQTCYITVLEGMENLTPLSREEKALLSDTLISENTRMACQTY
LEKEGTIRIKSFVEDVKDMFEQNPTALVGYAGKMGWEALVKFPDTITLQSQREWHLMQFISDVLNGIGDAFLMVSKACGK
KV
>Mature_162_residues
MKITINNNSYEASVGQRILDVARVHHEHIGYFCGGNGMCQTCYITVLEGMENLTPLSREEKALLSDTLISENTRMACQTY
LEKEGTIRIKSFVEDVKDMFEQNPTALVGYAGKMGWEALVKFPDTITLQSQREWHLMQFISDVLNGIGDAFLMVSKACGK
KV

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 18204; Mature: 18204

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITINNNSYEASVGQRILDVARVHHEHIGYFCGGNGMCQTCYITVLEGMENLTPLSREE
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHH
KALLSDTLISENTRMACQTYLEKEGTIRIKSFVEDVKDMFEQNPTALVGYAGKMGWEALV
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
KFPDTITLQSQREWHLMQFISDVLNGIGDAFLMVSKACGKKV
HCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITINNNSYEASVGQRILDVARVHHEHIGYFCGGNGMCQTCYITVLEGMENLTPLSREE
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHH
KALLSDTLISENTRMACQTYLEKEGTIRIKSFVEDVKDMFEQNPTALVGYAGKMGWEALV
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
KFPDTITLQSQREWHLMQFISDVLNGIGDAFLMVSKACGKKV
HCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]