| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189742
Identifier: 78189742
GI number: 78189742
Start: 2305915
End: 2306379
Strand: Reverse
Name: 78189742
Synonym: Cag_1786
Alternate gene names: NA
Gene position: 2306379-2305915 (Counterclockwise)
Preceding gene: 78189743
Following gene: 78189740
Centisome position: 89.67
GC content: 46.24
Gene sequence:
>465_bases ATGAGTGAAACTTTCCGTCAATTGCTTGACGAATCCATACAACTTGAGCTGAATCTCGCCAAGCTTTATACCGCCTATAA CGATTTGTTTGAAGAGGATGAAGATTTTTGGTGGGATTTAGCAATGGAAGAGCGGGGGCACGCTTCGCTGCTTCAGCATG AAAAAAACTCGCCACAGCAAGAGCCGTTTTTTCCTGAAAATTTGCTTGCTAACGATCTTGATGTCCTAAAAGCTGCCAAT AAGCGCATTCTTGATTTAGTGGCAGCTTGCAAAAGCACTCCACCCTCGCGCCTTGAAGCGCTTCGTACAGCCTATGAATT GGAAACTTCAGCGGGCGAATCGCACTTTCAGCGCTTTATGGAAAGCCCCGCAAGTTCTTTTGCTGCCAACATTTTTCAGC AACTGAACCAAGGCGATCGCGATCATGCTGAGCGCATTCAGCAATACATTGATGAGCTGGAGTAA
Upstream 100 bases:
>100_bases GCCATCAAGAGTTTGGGGTAAAGAGCTTGCAAGAGTATGCAGCGTATCGCGACACAGCTACCGCCACCTGTTAAGTATTA AGATTTAATAATCACATACC
Downstream 100 bases:
>100_bases TTACGGTTCGTCATACCGTTTTTTCTATAATTTATATGAATCCTTCGGATTCAATTTTCCTACACAATAACCATTTCGTA GAGGCAGATTCTATATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSETFRQLLDESIQLELNLAKLYTAYNDLFEEDEDFWWDLAMEERGHASLLQHEKNSPQQEPFFPENLLANDLDVLKAAN KRILDLVAACKSTPPSRLEALRTAYELETSAGESHFQRFMESPASSFAANIFQQLNQGDRDHAERIQQYIDELE
Sequences:
>Translated_154_residues MSETFRQLLDESIQLELNLAKLYTAYNDLFEEDEDFWWDLAMEERGHASLLQHEKNSPQQEPFFPENLLANDLDVLKAAN KRILDLVAACKSTPPSRLEALRTAYELETSAGESHFQRFMESPASSFAANIFQQLNQGDRDHAERIQQYIDELE >Mature_153_residues SETFRQLLDESIQLELNLAKLYTAYNDLFEEDEDFWWDLAMEERGHASLLQHEKNSPQQEPFFPENLLANDLDVLKAANK RILDLVAACKSTPPSRLEALRTAYELETSAGESHFQRFMESPASSFAANIFQQLNQGDRDHAERIQQYIDELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17840; Mature: 17709
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETFRQLLDESIQLELNLAKLYTAYNDLFEEDEDFWWDLAMEERGHASLLQHEKNSPQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCC EPFFPENLLANDLDVLKAANKRILDLVAACKSTPPSRLEALRTAYELETSAGESHFQRFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ESPASSFAANIFQQLNQGDRDHAERIQQYIDELE HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SETFRQLLDESIQLELNLAKLYTAYNDLFEEDEDFWWDLAMEERGHASLLQHEKNSPQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCC EPFFPENLLANDLDVLKAANKRILDLVAACKSTPPSRLEALRTAYELETSAGESHFQRFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ESPASSFAANIFQQLNQGDRDHAERIQQYIDELE HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA