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The map label for this gene is 78189725

Identifier: 78189725

GI number: 78189725

Start: 2286893

End: 2287318

Strand: Reverse

Name: 78189725

Synonym: Cag_1769

Alternate gene names: NA

Gene position: 2287318-2286893 (Counterclockwise)

Preceding gene: 78189726

Following gene: 78189715

Centisome position: 88.93

GC content: 28.87

Gene sequence:

>426_bases
GTGCAAAAAGATAATGCAATTAGGGTGGTTATAGATACAAATATTTGGATTGGTTTTTTAATTGGAAAAACTTTTTCAGA
TTTATATAAGGCTATAATCAATGATCAAATCAAGATATTGTTTAGTGATGAACTTTTTGCCGAACTGATAGAAGTATTAC
AACGCCCAAAGTTCCATAAATATTTTTCTCAAAATGATATCGCTGAACTTATTTCCCTTATTCATTTAAAAACAGAGTTT
GTTGAAATTACAGATCAATTTAATGATTGCCGTGATCCAAAAGATAATTTTCTTTTAGATGTTTGTGTTTCTGGTCATGC
CGATTATTTGCTTACAGGTGATGATGATTTGTTGATACTAAACCCATTTCATGAAGTGAAAATTATTAATTATCGAAAGT
TTACCGATATCTTGAAAAGGGTATAA

Upstream 100 bases:

>100_bases
CCGTTACGCTTTAATGCGTTACTCGAAAAGGTAAAAACCGATCAATTGACTTTACATGACATTACAACAGAAATAGAAAC
CGTAAGACAACAACGATACA

Downstream 100 bases:

>100_bases
TGGCACCTAATTCATCAAATTATAAACAAACCCTCCGCAACCGCTCCTGCAACTCCTGCACTTTGCTTTGGTTCCCAAGC
TTTTCATATACCGCAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQKDNAIRVVIDTNIWIGFLIGKTFSDLYKAIINDQIKILFSDELFAELIEVLQRPKFHKYFSQNDIAELISLIHLKTEF
VEITDQFNDCRDPKDNFLLDVCVSGHADYLLTGDDDLLILNPFHEVKIINYRKFTDILKRV

Sequences:

>Translated_141_residues
MQKDNAIRVVIDTNIWIGFLIGKTFSDLYKAIINDQIKILFSDELFAELIEVLQRPKFHKYFSQNDIAELISLIHLKTEF
VEITDQFNDCRDPKDNFLLDVCVSGHADYLLTGDDDLLILNPFHEVKIINYRKFTDILKRV
>Mature_141_residues
MQKDNAIRVVIDTNIWIGFLIGKTFSDLYKAIINDQIKILFSDELFAELIEVLQRPKFHKYFSQNDIAELISLIHLKTEF
VEITDQFNDCRDPKDNFLLDVCVSGHADYLLTGDDDLLILNPFHEVKIINYRKFTDILKRV

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16522; Mature: 16522

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDNAIRVVIDTNIWIGFLIGKTFSDLYKAIINDQIKILFSDELFAELIEVLQRPKFHK
CCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHH
YFSQNDIAELISLIHLKTEFVEITDQFNDCRDPKDNFLLDVCVSGHADYLLTGDDDLLIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCEEEE
NPFHEVKIINYRKFTDILKRV
CCCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MQKDNAIRVVIDTNIWIGFLIGKTFSDLYKAIINDQIKILFSDELFAELIEVLQRPKFHK
CCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHH
YFSQNDIAELISLIHLKTEFVEITDQFNDCRDPKDNFLLDVCVSGHADYLLTGDDDLLIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCEEEE
NPFHEVKIINYRKFTDILKRV
CCCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA