Click here to switch to the map view.

The map label for this gene is 78189692

Identifier: 78189692

GI number: 78189692

Start: 2255039

End: 2255812

Strand: Reverse

Name: 78189692

Synonym: Cag_1736

Alternate gene names: NA

Gene position: 2255812-2255039 (Counterclockwise)

Preceding gene: 78189694

Following gene: 78189691

Centisome position: 87.7

GC content: 46.12

Gene sequence:

>774_bases
ATGAATGAACGAGTTTTTTTAAAGATTTTGCTCACACTGCTTAGTAGTGGTGCTATTGCTGAAGTGATGGTTGTGCTGCT
GTTGGGATGGCACGGAGAAGCTCTGCTCTTTGTTTTTTTTATGAGCTGCTTTGCCGTAGCTATTGCGCTCGTGTTGCACA
AGCTGTATGGAACGGCTGAAGCTTCAGGGGCAATTGAATCGGTTTCAGCACGCCGAGTACGCGCCATGCAATCGGAGGAG
TTGCGCAGTCGGCTTGGTGCTTACAGCGTAGATGATGAATTTCTTGCTGGTACTCCACTACGCGCTAAGAGTACATCCTC
CACTTATGAAAAAAGCGATGTAGAGGCAATGATTCGCAAATTTGCGCCGCATGTTGGTGGTTTAAGCCGTTTACTTCAAA
TGGTGCAAGAACGAGACGAAGCCTCATTTGCGGCAGTGGCTAAGCAAGCTGGTTTGGCGAATGTTGAGCGCCAAACCGTT
ATTGATTATATACATATAATGCTTAATGCTGAAAAGGAGTGTGAGAGTAACACGAAGTCAGGCGAGGCAACAAGTCCATT
AACAGAATTTACTATGGAACGCGAAAGCTTCGACTCCTACATTCAGCGCTGCATGAGTGGCGAGGGCGATGATGGTGATT
TAAGTGATGAACTCTCGGTGGGGTTAGAAAATCCACTTACACCAAAAAGTGTAGGAATTCCACCATCTGATTTTTCTCAT
AGCCCAACCTCTATAATGGAGAGTTTGAAAAAACGTGCAGGGAGGGTGCCATGA

Upstream 100 bases:

>100_bases
TTTGTGTTGGCAACAGGTTGATAACGCCTTATGGTTCCAAGTACTATTATTACAATAAGAGCTAATTTATAAAACGTTGT
TTGAATTGAAACGAATCATT

Downstream 100 bases:

>100_bases
ATTTGCCTTTGCCACCTCTTAGCAAAGCCGCTTTGCGCCGTTATGCAGCCCTGCACCACAAAAAGCATCGCGATAGCGAC
AAACTTTTTTTAGCCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNERVFLKILLTLLSSGAIAEVMVVLLLGWHGEALLFVFFMSCFAVAIALVLHKLYGTAEASGAIESVSARRVRAMQSEE
LRSRLGAYSVDDEFLAGTPLRAKSTSSTYEKSDVEAMIRKFAPHVGGLSRLLQMVQERDEASFAAVAKQAGLANVERQTV
IDYIHIMLNAEKECESNTKSGEATSPLTEFTMERESFDSYIQRCMSGEGDDGDLSDELSVGLENPLTPKSVGIPPSDFSH
SPTSIMESLKKRAGRVP

Sequences:

>Translated_257_residues
MNERVFLKILLTLLSSGAIAEVMVVLLLGWHGEALLFVFFMSCFAVAIALVLHKLYGTAEASGAIESVSARRVRAMQSEE
LRSRLGAYSVDDEFLAGTPLRAKSTSSTYEKSDVEAMIRKFAPHVGGLSRLLQMVQERDEASFAAVAKQAGLANVERQTV
IDYIHIMLNAEKECESNTKSGEATSPLTEFTMERESFDSYIQRCMSGEGDDGDLSDELSVGLENPLTPKSVGIPPSDFSH
SPTSIMESLKKRAGRVP
>Mature_257_residues
MNERVFLKILLTLLSSGAIAEVMVVLLLGWHGEALLFVFFMSCFAVAIALVLHKLYGTAEASGAIESVSARRVRAMQSEE
LRSRLGAYSVDDEFLAGTPLRAKSTSSTYEKSDVEAMIRKFAPHVGGLSRLLQMVQERDEASFAAVAKQAGLANVERQTV
IDYIHIMLNAEKECESNTKSGEATSPLTEFTMERESFDSYIQRCMSGEGDDGDLSDELSVGLENPLTPKSVGIPPSDFSH
SPTSIMESLKKRAGRVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28059; Mature: 28059

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERVFLKILLTLLSSGAIAEVMVVLLLGWHGEALLFVFFMSCFAVAIALVLHKLYGTAE
CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ASGAIESVSARRVRAMQSEELRSRLGAYSVDDEFLAGTPLRAKSTSSTYEKSDVEAMIRK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH
FAPHVGGLSRLLQMVQERDEASFAAVAKQAGLANVERQTVIDYIHIMLNAEKECESNTKS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
GEATSPLTEFTMERESFDSYIQRCMSGEGDDGDLSDELSVGLENPLTPKSVGIPPSDFSH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
SPTSIMESLKKRAGRVP
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNERVFLKILLTLLSSGAIAEVMVVLLLGWHGEALLFVFFMSCFAVAIALVLHKLYGTAE
CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ASGAIESVSARRVRAMQSEELRSRLGAYSVDDEFLAGTPLRAKSTSSTYEKSDVEAMIRK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH
FAPHVGGLSRLLQMVQERDEASFAAVAKQAGLANVERQTVIDYIHIMLNAEKECESNTKS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
GEATSPLTEFTMERESFDSYIQRCMSGEGDDGDLSDELSVGLENPLTPKSVGIPPSDFSH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
SPTSIMESLKKRAGRVP
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA