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The map label for this gene is 78189684

Identifier: 78189684

GI number: 78189684

Start: 2244347

End: 2245516

Strand: Reverse

Name: 78189684

Synonym: Cag_1728

Alternate gene names: NA

Gene position: 2245516-2244347 (Counterclockwise)

Preceding gene: 78189686

Following gene: 78189680

Centisome position: 87.3

GC content: 49.23

Gene sequence:

>1170_bases
ATGCGGCTAACGTTTCCGCCAGCCGTTTCTTTACAATTCTTTAATATGAACAATCAAAGCATGATCTCCTCTTTTTTTCA
ACGCATGGCGTTTACGGCACTTGTGGCAAGCGCACTACCATCATCTCTTTTTGCTTACGACCGTGCTCATGTAACCTTGT
TGCAACAAGGTGTTGCGGTGTGGAATAACCAGCGTCAAGCAACCATGGGGCAAACGCTTGATTTATCGCGAGCACCGCTT
GCTAAGGCACAACTTGGCGAGGCGAATTTAGCGCATGTGTCGTTAAGCAGTGCTTTTTTACAAGCAGCAAACTTGCGTGG
GGCTAATTTGCAAGCGGCTAATTTGCGTTGGAGTGTGCTTGATGGTGCCGATTTGCGCGATGCGGTGCTGGTGGGTGCTC
ATTTATTTGAAGCAAGCTTGGTGAAAGCAGATGCTCGTGGCGCTAATTTTAAGAGTGCAACATCGTTGGAGCAAGCTGAT
CTTTCAGGCGCACTTGTTTCCAATAACACCATTGTGCCATCAGGTGAACGCGCTCACGGGCAGTGGGCGTTACGCCATCA
TGCTACGTTTGTGCAGGAGCCTGAGCGCCCGATTGCCTCTATTGCTTCAGCCATCTCATTTTCTCCCGAACGTACCATCA
CCTCACCGCCTAACTCTGCGCCAACAACGGTATCTCAATCTGCGGTAACTGCTCACCCCTCAAACGTTGTGCCATCACCA
CAAGCATCAGCGCAAGCGCCAATAACGAAAGAGTATGCCCGTGCTACGCTGAACGGGGTCAATTGGAGCAATGCGGATTT
AGCAGGTGCTAATTTTTATAAGGCTGATATGAAAGGTGCCCAGCTACAAGGTGCAAATTTGCAAGGCGCTCATTGTGATC
GGGCGTTTTTGCTTCAAGCCAATTTACAAGGTGCTAACCTTACGAAAGCACTGTTGTTTGGCGCTACACTCGACAAGGCT
GATTTAAGAAATGCTAATTTAACGGAAGCGTCGCTTTTTGGGGCAAATTGTGAGGGAGCTGATTTGCGTGGAGCTATTTT
AACGAGGGCAAACGTAACGGATGCGGTGTTGACTAATGCGCTTATTTCTTCCACCACCGTGCTGCCATCAGGTAAAGCGG
CAACACGGCAGTGGGCGCTCATGCAGCAAGCTATCTTTAGTCAGGATTGA

Upstream 100 bases:

>100_bases
TGCCACTATAAGAAGGAGTGTTATTTTGCATACGCTTTTATGAATACCTCATCTATGAAAATGTTTAAAAAATATGTTCT
TCACTTGAGTAACAAGAGTA

Downstream 100 bases:

>100_bases
GCTGCTACATTGCTGCTGGGAAAGCGTTTCTTATAAAAAAGACGTTGCAGCAAGTGAGCTTTGTGAATGTTGGGATCGTT
TGCCTGTAAACGATTTGTTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRLTFPPAVSLQFFNMNNQSMISSFFQRMAFTALVASALPSSLFAYDRAHVTLLQQGVAVWNNQRQATMGQTLDLSRAPL
AKAQLGEANLAHVSLSSAFLQAANLRGANLQAANLRWSVLDGADLRDAVLVGAHLFEASLVKADARGANFKSATSLEQAD
LSGALVSNNTIVPSGERAHGQWALRHHATFVQEPERPIASIASAISFSPERTITSPPNSAPTTVSQSAVTAHPSNVVPSP
QASAQAPITKEYARATLNGVNWSNADLAGANFYKADMKGAQLQGANLQGAHCDRAFLLQANLQGANLTKALLFGATLDKA
DLRNANLTEASLFGANCEGADLRGAILTRANVTDAVLTNALISSTTVLPSGKAATRQWALMQQAIFSQD

Sequences:

>Translated_389_residues
MRLTFPPAVSLQFFNMNNQSMISSFFQRMAFTALVASALPSSLFAYDRAHVTLLQQGVAVWNNQRQATMGQTLDLSRAPL
AKAQLGEANLAHVSLSSAFLQAANLRGANLQAANLRWSVLDGADLRDAVLVGAHLFEASLVKADARGANFKSATSLEQAD
LSGALVSNNTIVPSGERAHGQWALRHHATFVQEPERPIASIASAISFSPERTITSPPNSAPTTVSQSAVTAHPSNVVPSP
QASAQAPITKEYARATLNGVNWSNADLAGANFYKADMKGAQLQGANLQGAHCDRAFLLQANLQGANLTKALLFGATLDKA
DLRNANLTEASLFGANCEGADLRGAILTRANVTDAVLTNALISSTTVLPSGKAATRQWALMQQAIFSQD
>Mature_389_residues
MRLTFPPAVSLQFFNMNNQSMISSFFQRMAFTALVASALPSSLFAYDRAHVTLLQQGVAVWNNQRQATMGQTLDLSRAPL
AKAQLGEANLAHVSLSSAFLQAANLRGANLQAANLRWSVLDGADLRDAVLVGAHLFEASLVKADARGANFKSATSLEQAD
LSGALVSNNTIVPSGERAHGQWALRHHATFVQEPERPIASIASAISFSPERTITSPPNSAPTTVSQSAVTAHPSNVVPSP
QASAQAPITKEYARATLNGVNWSNADLAGANFYKADMKGAQLQGANLQGAHCDRAFLLQANLQGANLTKALLFGATLDKA
DLRNANLTEASLFGANCEGADLRGAILTRANVTDAVLTNALISSTTVLPSGKAATRQWALMQQAIFSQD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 41149; Mature: 41149

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTFPPAVSLQFFNMNNQSMISSFFQRMAFTALVASALPSSLFAYDRAHVTLLQQGVAV
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNNQRQATMGQTLDLSRAPLAKAQLGEANLAHVSLSSAFLQAANLRGANLQAANLRWSVL
HCCCCHHHCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCCCCCEEECCEEEEEE
DGADLRDAVLVGAHLFEASLVKADARGANFKSATSLEQADLSGALVSNNTIVPSGERAHG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCEECCCCCCCCC
QWALRHHATFVQEPERPIASIASAISFSPERTITSPPNSAPTTVSQSAVTAHPSNVVPSP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
QASAQAPITKEYARATLNGVNWSNADLAGANFYKADMKGAQLQGANLQGAHCDRAFLLQA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCEEEEEEE
NLQGANLTKALLFGATLDKADLRNANLTEASLFGANCEGADLRGAILTRANVTDAVLTNA
CCCCCCHHHHHHHCCCCCHHHCCCCCCCHHHEECCCCCCCCCCEEEEEECCCHHHHHHHH
LISSTTVLPSGKAATRQWALMQQAIFSQD
HHHCCEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLTFPPAVSLQFFNMNNQSMISSFFQRMAFTALVASALPSSLFAYDRAHVTLLQQGVAV
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNNQRQATMGQTLDLSRAPLAKAQLGEANLAHVSLSSAFLQAANLRGANLQAANLRWSVL
HCCCCHHHCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCCCCCEEECCEEEEEE
DGADLRDAVLVGAHLFEASLVKADARGANFKSATSLEQADLSGALVSNNTIVPSGERAHG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCEECCCCCCCCC
QWALRHHATFVQEPERPIASIASAISFSPERTITSPPNSAPTTVSQSAVTAHPSNVVPSP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
QASAQAPITKEYARATLNGVNWSNADLAGANFYKADMKGAQLQGANLQGAHCDRAFLLQA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCEEEEEEE
NLQGANLTKALLFGATLDKADLRNANLTEASLFGANCEGADLRGAILTRANVTDAVLTNA
CCCCCCHHHHHHHCCCCCHHHCCCCCCCHHHEECCCCCCCCCCEEEEEECCCHHHHHHHH
LISSTTVLPSGKAATRQWALMQQAIFSQD
HHHCCEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]