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The map label for this gene is ytxM [H]

Identifier: 78189676

GI number: 78189676

Start: 2234049

End: 2234846

Strand: Reverse

Name: ytxM [H]

Synonym: Cag_1720

Alternate gene names: 78189676

Gene position: 2234846-2234049 (Counterclockwise)

Preceding gene: 78189677

Following gene: 78189675

Centisome position: 86.89

GC content: 49.62

Gene sequence:

>798_bases
ATGATAATGCAGCCACCACTCCACATTGAAATAATTGGCAATAAAGCGTTACCGAAAATTGTTTTCCTGCACGGCTTTCT
TGGTTCGGGACGCGATTGGCTGCCTCTTGCTGAAATGCTTACAAGCCACTATTGCTGTGTGTTGGTTGATTTGCCCGGAC
ATGGCAGTGCAACGCTGAGCGCAAGTGATGAGCATCACGCTTATTTTACGGCAACAGTGGAGGCGCTTGCAACGGTAATT
CAGCCAATCAGCCCTGAGCCTTGCCGACTTGTGGGCTATTCAATGGGCGGACGTATTGCCTTAGCGCTCATGCTTACCCA
TCCCGAACTTTTCCATCAAGCGGTGATTGTTTCAGCTTCACCGGGCTTGCCAACAGAGGAGGAGCGTGCAAAGCGTCGGG
CAGGTGATGAGGGCATTGCGCGTAAAATTGAGCGCAACTTCCCCGATTTTTTGGAGGCGTGGTACCAGCAGCCTCTTTTT
TCCACCTTAAAAAATCATCCCCTTTTTCAAGAAATAGAGCGTAAACGCGCTATCAACAATTCCGAAAGCCTTGCGGCGGC
GCTTCGTTTGTTGGGTACAGGTCAGCAGCCGTCGTTTTGGGATGCACTGAGCAAATGTGCTGTACCAACGCTCTTTATTG
CGGGAGAAAAAGATGAGCGCTACGTTGCGATTGCCCGCCAAATGGTTAAGTTAGCGCCTCACGCAACCCTCTCCATTGTG
CCCAACTGTGGGCATACGCTTCACATTGAAAACAAGGAGAGTTTTGTGGAACAACTCCACACTTTTTTTAACCAATAA

Upstream 100 bases:

>100_bases
AATATTACGAGAAATATGATGGCGAACGTTATCTCATTGGCATTGTTTTTGATCCAAAGGCGAGAAACGTCAGTCAGTTT
GTATGGGAAAAGGTTTAATT

Downstream 100 bases:

>100_bases
CATTTGTAACCCTATGAGCGCTATTGCATGGGTCGCCGCTGGCGAGTTTACTGATATTTTATACCACAAAGCTGAAGGCA
TTGCGAAAATCACCATTAAC

Product: thioesterase, menaquinone synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIMQPPLHIEIIGNKALPKIVFLHGFLGSGRDWLPLAEMLTSHYCCVLVDLPGHGSATLSASDEHHAYFTATVEALATVI
QPISPEPCRLVGYSMGGRIALALMLTHPELFHQAVIVSASPGLPTEEERAKRRAGDEGIARKIERNFPDFLEAWYQQPLF
STLKNHPLFQEIERKRAINNSESLAAALRLLGTGQQPSFWDALSKCAVPTLFIAGEKDERYVAIARQMVKLAPHATLSIV
PNCGHTLHIENKESFVEQLHTFFNQ

Sequences:

>Translated_265_residues
MIMQPPLHIEIIGNKALPKIVFLHGFLGSGRDWLPLAEMLTSHYCCVLVDLPGHGSATLSASDEHHAYFTATVEALATVI
QPISPEPCRLVGYSMGGRIALALMLTHPELFHQAVIVSASPGLPTEEERAKRRAGDEGIARKIERNFPDFLEAWYQQPLF
STLKNHPLFQEIERKRAINNSESLAAALRLLGTGQQPSFWDALSKCAVPTLFIAGEKDERYVAIARQMVKLAPHATLSIV
PNCGHTLHIENKESFVEQLHTFFNQ
>Mature_265_residues
MIMQPPLHIEIIGNKALPKIVFLHGFLGSGRDWLPLAEMLTSHYCCVLVDLPGHGSATLSASDEHHAYFTATVEALATVI
QPISPEPCRLVGYSMGGRIALALMLTHPELFHQAVIVSASPGLPTEEERAKRRAGDEGIARKIERNFPDFLEAWYQQPLF
STLKNHPLFQEIERKRAINNSESLAAALRLLGTGQQPSFWDALSKCAVPTLFIAGEKDERYVAIARQMVKLAPHATLSIV
PNCGHTLHIENKESFVEQLHTFFNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=248, Percent_Identity=29.8387096774194, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29422; Mature: 29422

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMQPPLHIEIIGNKALPKIVFLHGFLGSGRDWLPLAEMLTSHYCCVLVDLPGHGSATLS
CCCCCCEEEEEECCCCCHHHHHEEHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEC
ASDEHHAYFTATVEALATVIQPISPEPCRLVGYSMGGRIALALMLTHPELFHQAVIVSAS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEHHCHHHHHHEEEEECC
PGLPTEEERAKRRAGDEGIARKIERNFPDFLEAWYQQPLFSTLKNHPLFQEIERKRAINN
CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHCCC
SESLAAALRLLGTGQQPSFWDALSKCAVPTLFIAGEKDERYVAIARQMVKLAPHATLSIV
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
PNCGHTLHIENKESFVEQLHTFFNQ
CCCCCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIMQPPLHIEIIGNKALPKIVFLHGFLGSGRDWLPLAEMLTSHYCCVLVDLPGHGSATLS
CCCCCCEEEEEECCCCCHHHHHEEHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEC
ASDEHHAYFTATVEALATVIQPISPEPCRLVGYSMGGRIALALMLTHPELFHQAVIVSAS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEHHCHHHHHHEEEEECC
PGLPTEEERAKRRAGDEGIARKIERNFPDFLEAWYQQPLFSTLKNHPLFQEIERKRAINN
CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHCCC
SESLAAALRLLGTGQQPSFWDALSKCAVPTLFIAGEKDERYVAIARQMVKLAPHATLSIV
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
PNCGHTLHIENKESFVEQLHTFFNQ
CCCCCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]