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The map label for this gene is 78189583

Identifier: 78189583

GI number: 78189583

Start: 2124104

End: 2124622

Strand: Reverse

Name: 78189583

Synonym: Cag_1625

Alternate gene names: NA

Gene position: 2124622-2124104 (Counterclockwise)

Preceding gene: 78189589

Following gene: 78189582

Centisome position: 82.6

GC content: 45.86

Gene sequence:

>519_bases
ATGAAATGGCTCAATTCATTAGCAACAAAGCTTAGCCTTACAAAGGCAGAAATAACGTTAATTACCGCATTGCTTGGCTT
TTTACTGCTTGGCGGTGTGGTAAAAAATTTTCAGGATGTTGAAGAGCGTACCACCCTCATCAAGCGAGCTGAAGCCGCAC
GTTTGGATGGGGCTGAAGTTGATAGTTTGCTGCGCCTTGCTTCGTTAAAAGAGGGCGATTTATCGGCTGAGCCTGTTGCA
GAGCAGGCTGAAGAGGGCGAGGTTGCACCATCAACCAAGAAAAAAAGTAAAAGCGCACGGAGCGAAAAAAAAGAGTTTCA
CGGCACCGTTGCCTTTAACAAAGCTTCAGCCGCACAGTTGCAGAAAATACCGGGCGTTGGTACTGTTATGGCTGAGCGCA
TGATTGCGTTTCGATTGTTAAAAGGGGGAAAAGTGAGTGATATGAAAGAGCTGTTGGAGGTAAAAGGCATTGGTGCCAAA
AAACTTGAGCAACTGCAACCCTATCTGACGCTTGATTAA

Upstream 100 bases:

>100_bases
ACGGTATTGATAGAGGGGCACTTGCAAAAGATGCGTACTCATTATTTTTACTCAGAAGTGTAATATTCTCCTGTAAGTTG
TTATTAAATAATGACTTTCT

Downstream 100 bases:

>100_bases
ATGCTTCTTTTTCCATCCATTATGTTCCAAGTTATCCAATGAGTTTTGAACTCCATTTTCCGTATGAACAGAGCACGTTG
TATGATATCAGCATTTTCTT

Product: helix-hairpin-helix DNA-binding, class 1

Products: NA

Alternate protein names: Helix-Hairpin-Helix Motif

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKWLNSLATKLSLTKAEITLITALLGFLLLGGVVKNFQDVEERTTLIKRAEAARLDGAEVDSLLRLASLKEGDLSAEPVA
EQAEEGEVAPSTKKKSKSARSEKKEFHGTVAFNKASAAQLQKIPGVGTVMAERMIAFRLLKGGKVSDMKELLEVKGIGAK
KLEQLQPYLTLD

Sequences:

>Translated_172_residues
MKWLNSLATKLSLTKAEITLITALLGFLLLGGVVKNFQDVEERTTLIKRAEAARLDGAEVDSLLRLASLKEGDLSAEPVA
EQAEEGEVAPSTKKKSKSARSEKKEFHGTVAFNKASAAQLQKIPGVGTVMAERMIAFRLLKGGKVSDMKELLEVKGIGAK
KLEQLQPYLTLD
>Mature_172_residues
MKWLNSLATKLSLTKAEITLITALLGFLLLGGVVKNFQDVEERTTLIKRAEAARLDGAEVDSLLRLASLKEGDLSAEPVA
EQAEEGEVAPSTKKKSKSARSEKKEFHGTVAFNKASAAQLQKIPGVGTVMAERMIAFRLLKGGKVSDMKELLEVKGIGAK
KLEQLQPYLTLD

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18651; Mature: 18651

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLNSLATKLSLTKAEITLITALLGFLLLGGVVKNFQDVEERTTLIKRAEAARLDGAEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DSLLRLASLKEGDLSAEPVAEQAEEGEVAPSTKKKSKSARSEKKEFHGTVAFNKASAAQL
HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEECHHHHHHH
QKIPGVGTVMAERMIAFRLLKGGKVSDMKELLEVKGIGAKKLEQLQPYLTLD
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKWLNSLATKLSLTKAEITLITALLGFLLLGGVVKNFQDVEERTTLIKRAEAARLDGAEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DSLLRLASLKEGDLSAEPVAEQAEEGEVAPSTKKKSKSARSEKKEFHGTVAFNKASAAQL
HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEECHHHHHHH
QKIPGVGTVMAERMIAFRLLKGGKVSDMKELLEVKGIGAKKLEQLQPYLTLD
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA