| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189570
Identifier: 78189570
GI number: 78189570
Start: 2103687
End: 2104634
Strand: Reverse
Name: 78189570
Synonym: Cag_1610
Alternate gene names: NA
Gene position: 2104634-2103687 (Counterclockwise)
Preceding gene: 78189571
Following gene: 78189569
Centisome position: 81.83
GC content: 37.87
Gene sequence:
>948_bases ATGAAAACAGAAATGCATCCATTTGAACGAATTTTATCTGTCTCAACAGAAGACATTGAACTCGAACTGAGAGGTATTAC GGAAATTAACTGGGCAGACTTTTGGCTCAATCCAAGAAAATTACGAGGTAGCGACTTCTTAATGAGATGGTCGCAAGGCG TATGGAGTGAAAAACGTCTGATTGATGCTGTTAATAATACTGGTGAATTTTATGCGATTGCTTATGGTCCAAGTGGAACA GCACCAACAGATGATGTAAGAGCATTTGAATTATACTTTGAACGATTAGAAGCTGCTGGACTTGGAAATATTAAACGACC AGATTTGTTAGTTTTCAAAATTTCAGACAGAGAATTTGTTGATGACTTTTTAAGTAAAAATGGTGGAGAAGAAGAACTAC CATTTATCACAGAGGATAAACTACAAGCTCTTGTTCAAAAAGCAATCATTGCGGTTGAGTGTGAAAACTCGCTTTGGGTT GCTGAAAAAATGCCTGATTACAGAACACCTATGAAAGCGCAAAGACGACTTGGTGGTAAAATGGGTCTTGCGAAAAATGC GGTTCTTCCGACTGTTATCATTAAAGAAGAAGACCGTATTCCTCTAAATAAATGGCAAGAAGAAAATAGAATTCCAATTC ACGTTTGGCACGTATTCTTTGACAGAGCATACGGACTTTCTTTTGATGAAGCACAGCGATTAGTAACTGAGGGATTAATT CTTCCAACAGAGCAAGTTTTTCAAGCTCCAGGCGGTGCCACAACAAAGAAAGCCATCTATAAATATTACTATCATTATGC ATATCCGCTTGGTGTTGCAAGCGAAAGACCACAACTAATTCCTGCATTTATTGAGGACAAAAATGGACACATCTTGCCTT ATGTAAAATTTGAAGGAGGTTCATTGACAATTGCAGACGAAGCAATTAACGTCTTAAACCAACTCTGA
Upstream 100 bases:
>100_bases ACCTGCCATTTTAAGGAAAGACAAATGAAACATTGGGAATAAAATAAAAACGTTTACCAACGAGAAACTAAGAATAAAAA GTAACTTTGAGGTTTTAAAT
Downstream 100 bases:
>100_bases TGGGAAAATTAAAAGCACATCAGAAACTGCCTGCTGAATGGAACGAAAGAGAAATTCTTCGTGATAAAGGTCAATTTTGG ACACCGAGTTGGGTAGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL
Sequences:
>Translated_315_residues MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL >Mature_315_residues MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36034; Mature: 36034
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRL CCCCCCHHHHHHHCCCCCEEEEEECCEEECHHHHCCCHHHCCCCHHHHHHHCCCCHHHHH IDAVNNTGEFYAIAYGPSGTAPTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFV HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH DDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWVAEKMPDYRTPMKAQRRLGGK HHHHHCCCCCCCCCEECHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHCCCC MGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCCC LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGG CCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEHEEECCCCCEEEEEEECCC SLTIADEAINVLNQL EEEEHHHHHHHHHCC >Mature Secondary Structure MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRL CCCCCCHHHHHHHCCCCCEEEEEECCEEECHHHHCCCHHHCCCCHHHHHHHCCCCHHHHH IDAVNNTGEFYAIAYGPSGTAPTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFV HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH DDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWVAEKMPDYRTPMKAQRRLGGK HHHHHCCCCCCCCCEECHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHCCCC MGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCCC LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGG CCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEHEEECCCCCEEEEEEECCC SLTIADEAINVLNQL EEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA