Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189570

Identifier: 78189570

GI number: 78189570

Start: 2103687

End: 2104634

Strand: Reverse

Name: 78189570

Synonym: Cag_1610

Alternate gene names: NA

Gene position: 2104634-2103687 (Counterclockwise)

Preceding gene: 78189571

Following gene: 78189569

Centisome position: 81.83

GC content: 37.87

Gene sequence:

>948_bases
ATGAAAACAGAAATGCATCCATTTGAACGAATTTTATCTGTCTCAACAGAAGACATTGAACTCGAACTGAGAGGTATTAC
GGAAATTAACTGGGCAGACTTTTGGCTCAATCCAAGAAAATTACGAGGTAGCGACTTCTTAATGAGATGGTCGCAAGGCG
TATGGAGTGAAAAACGTCTGATTGATGCTGTTAATAATACTGGTGAATTTTATGCGATTGCTTATGGTCCAAGTGGAACA
GCACCAACAGATGATGTAAGAGCATTTGAATTATACTTTGAACGATTAGAAGCTGCTGGACTTGGAAATATTAAACGACC
AGATTTGTTAGTTTTCAAAATTTCAGACAGAGAATTTGTTGATGACTTTTTAAGTAAAAATGGTGGAGAAGAAGAACTAC
CATTTATCACAGAGGATAAACTACAAGCTCTTGTTCAAAAAGCAATCATTGCGGTTGAGTGTGAAAACTCGCTTTGGGTT
GCTGAAAAAATGCCTGATTACAGAACACCTATGAAAGCGCAAAGACGACTTGGTGGTAAAATGGGTCTTGCGAAAAATGC
GGTTCTTCCGACTGTTATCATTAAAGAAGAAGACCGTATTCCTCTAAATAAATGGCAAGAAGAAAATAGAATTCCAATTC
ACGTTTGGCACGTATTCTTTGACAGAGCATACGGACTTTCTTTTGATGAAGCACAGCGATTAGTAACTGAGGGATTAATT
CTTCCAACAGAGCAAGTTTTTCAAGCTCCAGGCGGTGCCACAACAAAGAAAGCCATCTATAAATATTACTATCATTATGC
ATATCCGCTTGGTGTTGCAAGCGAAAGACCACAACTAATTCCTGCATTTATTGAGGACAAAAATGGACACATCTTGCCTT
ATGTAAAATTTGAAGGAGGTTCATTGACAATTGCAGACGAAGCAATTAACGTCTTAAACCAACTCTGA

Upstream 100 bases:

>100_bases
ACCTGCCATTTTAAGGAAAGACAAATGAAACATTGGGAATAAAATAAAAACGTTTACCAACGAGAAACTAAGAATAAAAA
GTAACTTTGAGGTTTTAAAT

Downstream 100 bases:

>100_bases
TGGGAAAATTAAAAGCACATCAGAAACTGCCTGCTGAATGGAACGAAAGAGAAATTCTTCGTGATAAAGGTCAATTTTGG
ACACCGAGTTGGGTAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT
APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV
AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI
LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL

Sequences:

>Translated_315_residues
MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT
APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV
AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI
LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL
>Mature_315_residues
MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRLIDAVNNTGEFYAIAYGPSGT
APTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFVDDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWV
AEKMPDYRTPMKAQRRLGGKMGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI
LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGGSLTIADEAINVLNQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36034; Mature: 36034

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRL
CCCCCCHHHHHHHCCCCCEEEEEECCEEECHHHHCCCHHHCCCCHHHHHHHCCCCHHHHH
IDAVNNTGEFYAIAYGPSGTAPTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFV
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
DDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWVAEKMPDYRTPMKAQRRLGGK
HHHHHCCCCCCCCCEECHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHCCCC
MGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI
CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCCC
LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGG
CCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEHEEECCCCCEEEEEEECCC
SLTIADEAINVLNQL
EEEEHHHHHHHHHCC
>Mature Secondary Structure
MKTEMHPFERILSVSTEDIELELRGITEINWADFWLNPRKLRGSDFLMRWSQGVWSEKRL
CCCCCCHHHHHHHCCCCCEEEEEECCEEECHHHHCCCHHHCCCCHHHHHHHCCCCHHHHH
IDAVNNTGEFYAIAYGPSGTAPTDDVRAFELYFERLEAAGLGNIKRPDLLVFKISDREFV
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
DDFLSKNGGEEELPFITEDKLQALVQKAIIAVECENSLWVAEKMPDYRTPMKAQRRLGGK
HHHHHCCCCCCCCCEECHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHCCCC
MGLAKNAVLPTVIIKEEDRIPLNKWQEENRIPIHVWHVFFDRAYGLSFDEAQRLVTEGLI
CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCCC
LPTEQVFQAPGGATTKKAIYKYYYHYAYPLGVASERPQLIPAFIEDKNGHILPYVKFEGG
CCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEHEEECCCCCEEEEEEECCC
SLTIADEAINVLNQL
EEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA