Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

Click here to switch to the map view.

The map label for this gene is 78189470

Identifier: 78189470

GI number: 78189470

Start: 1977873

End: 1978835

Strand: Reverse

Name: 78189470

Synonym: Cag_1509

Alternate gene names: NA

Gene position: 1978835-1977873 (Counterclockwise)

Preceding gene: 78189472

Following gene: 78189457

Centisome position: 76.94

GC content: 44.24

Gene sequence:

>963_bases
ATGGCAAATAATCTACTCCTACCGAACCAGCGCGACGACTACGACAGCCCATGGAAAGAGGCTATTGAACTCTACTTCCC
TGAATTCATGGCATGGTACTTTCCCAATGCTTATGCCGCTATTGATTGGTCAAAACCCTATCACTTTCTTGATCAAGAAC
TCCGCTCCATTTTACCAGAAGCTGAGAATGGTAAACGCATTGTTGATAAGTTAGTGCAAGTGCATCTTTTGGATGGCAAA
GAGCGTTGTTTGTATATTCAGATTGAAGTGCAAGGCAACCGTGAAACTGACTTTCCAAGAAGAATCTTTATTTGCAACTA
CCGTATTTTTGACAAATATGGAAAGCCTGTAGCCAGCTTTGTGATTCTTACGGATAGTGATAGCAGTTGGCGCCCAACCG
CGTATAGCTATGAATTTGCGGGCAGCAAAATGACGTTGGAATTTGACATGGTGAAGCTGTTGGATTTTGAGCCACGCATG
AAGGAACTGCTTGCTTCCGACAATGCGTTTGCATTGGTAACAGCCGCACATTTGCTTACGCAGAAAACTCGCGAAAAATC
ACTTGAGCGCCTTGATGCAAAAAGCCAATTGATACGTTTACTCTACAACAAGCAATGGACAAAAGAGCGAGTAAGAGAAC
TCTTTCGCGTTATTGACTGGTTTCTGGAACTTCCGAAAGAGTTAGAACAACAATTACGAACCGAAATTTATAACATAGAG
GAGGAACAAAAGATGAAATATATTTCAAGTATTGAGCGTTATGCCATGGAAAAAGGGATATTGGAAGGCATGGAGAGAGG
CATGGTGGCAGGCAAAGAGGTTGGTGTGCTTGAGGGCATGGAAAGAGGTCTTGAAGAAGGGTTACTAAAAGGGAGGCTTG
AGGTGGCGCAGCGGTTGGTGGCGAGCGGTATGAGTAAAGCGGAAGCGGCATCATTTGCTGGCGTAAGTGTGGAGATGTTG
TAG

Upstream 100 bases:

>100_bases
ACATTCTTGCCAGCACTCTTTTTTTACCTACGCCAAACATCTTGTGCAAAAAAACATAAAGCGTATATTAGGCGAATAAT
TATTCATAAATATACGCTTT

Downstream 100 bases:

>100_bases
GCTTGAGAGCATAGGGCTGCACCCTATGTTGATGACTTTTGTAATGTAGAGACGCGATTAATCGCGTCTCTACACGCTAT
GCCCAATTGTTTGATTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGK
ERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRM
KELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE
EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML

Sequences:

>Translated_320_residues
MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGK
ERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRM
KELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE
EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML
>Mature_319_residues
ANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGKE
RCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMK
ELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIEE
EQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37317; Mature: 37186

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC
AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASF
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCCEEEE
VILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMKELLASDNAFALVTAAHLLT
EEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
QKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGMSKAEAASFAGVSVEML
HHCCCHHHHHHHCCCEEEEC
>Mature Secondary Structure 
ANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC
AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASF
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCCEEEE
VILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMKELLASDNAFALVTAAHLLT
EEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
QKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGMSKAEAASFAGVSVEML
HHCCCHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA