| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189470
Identifier: 78189470
GI number: 78189470
Start: 1977873
End: 1978835
Strand: Reverse
Name: 78189470
Synonym: Cag_1509
Alternate gene names: NA
Gene position: 1978835-1977873 (Counterclockwise)
Preceding gene: 78189472
Following gene: 78189457
Centisome position: 76.94
GC content: 44.24
Gene sequence:
>963_bases ATGGCAAATAATCTACTCCTACCGAACCAGCGCGACGACTACGACAGCCCATGGAAAGAGGCTATTGAACTCTACTTCCC TGAATTCATGGCATGGTACTTTCCCAATGCTTATGCCGCTATTGATTGGTCAAAACCCTATCACTTTCTTGATCAAGAAC TCCGCTCCATTTTACCAGAAGCTGAGAATGGTAAACGCATTGTTGATAAGTTAGTGCAAGTGCATCTTTTGGATGGCAAA GAGCGTTGTTTGTATATTCAGATTGAAGTGCAAGGCAACCGTGAAACTGACTTTCCAAGAAGAATCTTTATTTGCAACTA CCGTATTTTTGACAAATATGGAAAGCCTGTAGCCAGCTTTGTGATTCTTACGGATAGTGATAGCAGTTGGCGCCCAACCG CGTATAGCTATGAATTTGCGGGCAGCAAAATGACGTTGGAATTTGACATGGTGAAGCTGTTGGATTTTGAGCCACGCATG AAGGAACTGCTTGCTTCCGACAATGCGTTTGCATTGGTAACAGCCGCACATTTGCTTACGCAGAAAACTCGCGAAAAATC ACTTGAGCGCCTTGATGCAAAAAGCCAATTGATACGTTTACTCTACAACAAGCAATGGACAAAAGAGCGAGTAAGAGAAC TCTTTCGCGTTATTGACTGGTTTCTGGAACTTCCGAAAGAGTTAGAACAACAATTACGAACCGAAATTTATAACATAGAG GAGGAACAAAAGATGAAATATATTTCAAGTATTGAGCGTTATGCCATGGAAAAAGGGATATTGGAAGGCATGGAGAGAGG CATGGTGGCAGGCAAAGAGGTTGGTGTGCTTGAGGGCATGGAAAGAGGTCTTGAAGAAGGGTTACTAAAAGGGAGGCTTG AGGTGGCGCAGCGGTTGGTGGCGAGCGGTATGAGTAAAGCGGAAGCGGCATCATTTGCTGGCGTAAGTGTGGAGATGTTG TAG
Upstream 100 bases:
>100_bases ACATTCTTGCCAGCACTCTTTTTTTACCTACGCCAAACATCTTGTGCAAAAAAACATAAAGCGTATATTAGGCGAATAAT TATTCATAAATATACGCTTT
Downstream 100 bases:
>100_bases GCTTGAGAGCATAGGGCTGCACCCTATGTTGATGACTTTTGTAATGTAGAGACGCGATTAATCGCGTCTCTACACGCTAT GCCCAATTGTTTGATTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGK ERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRM KELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML
Sequences:
>Translated_320_residues MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGK ERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRM KELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML >Mature_319_residues ANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPEAENGKRIVDKLVQVHLLDGKE RCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASFVILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMK ELLASDNAFALVTAAHLLTQKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIEE EQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLVASGMSKAEAASFAGVSVEML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37317; Mature: 37186
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASF CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCCEEEE VILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMKELLASDNAFALVTAAHLLT EEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH QKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGMSKAEAASFAGVSVEML HHCCCHHHHHHHCCCEEEEC >Mature Secondary Structure ANNLLLPNQRDDYDSPWKEAIELYFPEFMAWYFPNAYAAIDWSKPYHFLDQELRSILPE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC AENGKRIVDKLVQVHLLDGKERCLYIQIEVQGNRETDFPRRIFICNYRIFDKYGKPVASF CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCCEEEE VILTDSDSSWRPTAYSYEFAGSKMTLEFDMVKLLDFEPRMKELLASDNAFALVTAAHLLT EEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH QKTREKSLERLDAKSQLIRLLYNKQWTKERVRELFRVIDWFLELPKELEQQLRTEIYNIE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EEQKMKYISSIERYAMEKGILEGMERGMVAGKEVGVLEGMERGLEEGLLKGRLEVAQRLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGMSKAEAASFAGVSVEML HHCCCHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA