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The map label for this gene is ftsY [H]

Identifier: 78189179

GI number: 78189179

Start: 1611112

End: 1612065

Strand: Reverse

Name: ftsY [H]

Synonym: Cag_1212

Alternate gene names: 78189179

Gene position: 1612065-1611112 (Counterclockwise)

Preceding gene: 78189181

Following gene: 78189177

Centisome position: 62.68

GC content: 47.9

Gene sequence:

>954_bases
ATGGGTTTTTTTGACAAGTTCAAATTATCGCGCTTAAAAGAAGGGCTTGAAAAAACCCGCGATACCCTTCGCGAAAAGCT
TTCCGTTATTACAAAAGGCAAAACGGAAATTGATGATGAGTTCCTTGAGGAGCTTGAAACTATTTTAGTTGGTGCCGATG
TGGGGGTTGAAACCACGCTTGCTATTGTTGATGCTATTACCGAGCGTGCTAAAAAGGAGACCTACCACTCCGAAACCGAG
CTAAACCGTATGCTGATTGATGAAATTCAGCAGATGCTTCAAGAGAGTAGCGATGAGCATCCCGTTGATTTTGATGCGCC
ACTACCAGCGAAGCCTTATGTGATTTTAGTGGTTGGCGTTAATGGTGCGGGTAAAACAACCAGCATTGCTAAGTTAGCCC
ACAATTATGACCAAGCGGGTAAAAAGGTGATTATTGCGGCGGCTGATACTTTTCGTGCGGCGGCGTATGAGCAGCTTCAA
ATTTGGGCTGATCGTGCGGGTGTGCCCATGATTGGGCAGGGGCAGGGGGCTGATCCTGCATCGGTGGTTTTTGATGCGGT
GAGTGCGGCGGTGTCGCGCAATGCCGATGTCGTGTTGGTTGATACTGCTGGGCGGTTGCACAACAAAAGCCACTTAATGG
AGGAGCTTGCTAAAATTATGCGCGTTGCTAAAAAGCGCATTCCCGAAGCGCCGCATGAGGTGCTTTTGGTGCTTGATGGC
ACAACGGGGCAGAATGCGGTGCAGCAAGCGCAGGAGTTTACCAAATTTGTACAAGTTACGGGTTTAGTGGTTACCAAGCT
TGATGGCACCTCAAAAGGTGGCATTGTGCTCTCCATTTCGCGCGACTTAAAATTGCCCGTTAAATATATTGGCGTTGGTG
AAAAAATTGATGATCTCCAGCTTTTTGACCGTCGTAATTTTGTGGGCGCACTGTTAGGGAAGGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
TGTTACATTTCGCCTCTTGCAATTGGTTTTGCAATGAGATTCTATGTCAATGTGTAGTGAGCCTTAGTTTTTATTAATTG
CCCTTAATATTATTCTTTTT

Downstream 100 bases:

>100_bases
GGGGTTAGTGCCGTTTTAAATGAGGTAGAAAAATGAATATTGCAACAAAACCACTGCATGATATTAATATCAAAGCAATT
ACCTTATTAAATGGTTCTTT

Product: cell division transporter substrate-binding protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MGFFDKFKLSRLKEGLEKTRDTLREKLSVITKGKTEIDDEFLEELETILVGADVGVETTLAIVDAITERAKKETYHSETE
LNRMLIDEIQQMLQESSDEHPVDFDAPLPAKPYVILVVGVNGAGKTTSIAKLAHNYDQAGKKVIIAAADTFRAAAYEQLQ
IWADRAGVPMIGQGQGADPASVVFDAVSAAVSRNADVVLVDTAGRLHNKSHLMEELAKIMRVAKKRIPEAPHEVLLVLDG
TTGQNAVQQAQEFTKFVQVTGLVVTKLDGTSKGGIVLSISRDLKLPVKYIGVGEKIDDLQLFDRRNFVGALLGKEEK

Sequences:

>Translated_317_residues
MGFFDKFKLSRLKEGLEKTRDTLREKLSVITKGKTEIDDEFLEELETILVGADVGVETTLAIVDAITERAKKETYHSETE
LNRMLIDEIQQMLQESSDEHPVDFDAPLPAKPYVILVVGVNGAGKTTSIAKLAHNYDQAGKKVIIAAADTFRAAAYEQLQ
IWADRAGVPMIGQGQGADPASVVFDAVSAAVSRNADVVLVDTAGRLHNKSHLMEELAKIMRVAKKRIPEAPHEVLLVLDG
TTGQNAVQQAQEFTKFVQVTGLVVTKLDGTSKGGIVLSISRDLKLPVKYIGVGEKIDDLQLFDRRNFVGALLGKEEK
>Mature_316_residues
GFFDKFKLSRLKEGLEKTRDTLREKLSVITKGKTEIDDEFLEELETILVGADVGVETTLAIVDAITERAKKETYHSETEL
NRMLIDEIQQMLQESSDEHPVDFDAPLPAKPYVILVVGVNGAGKTTSIAKLAHNYDQAGKKVIIAAADTFRAAAYEQLQI
WADRAGVPMIGQGQGADPASVVFDAVSAAVSRNADVVLVDTAGRLHNKSHLMEELAKIMRVAKKRIPEAPHEVLLVLDGT
TGQNAVQQAQEFTKFVQVTGLVVTKLDGTSKGGIVLSISRDLKLPVKYIGVGEKIDDLQLFDRRNFVGALLGKEEK

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=296, Percent_Identity=32.7702702702703, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI226371618, Length=207, Percent_Identity=37.1980676328502, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI23308697, Length=292, Percent_Identity=29.7945205479452, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI295424842, Length=310, Percent_Identity=29.0322580645161, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=34.5588235294118, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1789874, Length=318, Percent_Identity=50, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1788963, Length=305, Percent_Identity=32.7868852459016, Blast_Score=137, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=295, Percent_Identity=31.1864406779661, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=30.1003344481605, Blast_Score=115, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=284, Percent_Identity=33.0985915492958, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=257, Percent_Identity=28.4046692607004, Blast_Score=96, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=36.231884057971, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24641198, Length=336, Percent_Identity=29.1666666666667, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34681; Mature: 34550

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFDKFKLSRLKEGLEKTRDTLREKLSVITKGKTEIDDEFLEELETILVGADVGVETTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
AIVDAITERAKKETYHSETELNRMLIDEIQQMLQESSDEHPVDFDAPLPAKPYVILVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
NGAGKTTSIAKLAHNYDQAGKKVIIAAADTFRAAAYEQLQIWADRAGVPMIGQGQGADPA
CCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
SVVFDAVSAAVSRNADVVLVDTAGRLHNKSHLMEELAKIMRVAKKRIPEAPHEVLLVLDG
HHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TTGQNAVQQAQEFTKFVQVTGLVVTKLDGTSKGGIVLSISRDLKLPVKYIGVGEKIDDLQ
CCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCHHHH
LFDRRNFVGALLGKEEK
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GFFDKFKLSRLKEGLEKTRDTLREKLSVITKGKTEIDDEFLEELETILVGADVGVETTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
AIVDAITERAKKETYHSETELNRMLIDEIQQMLQESSDEHPVDFDAPLPAKPYVILVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
NGAGKTTSIAKLAHNYDQAGKKVIIAAADTFRAAAYEQLQIWADRAGVPMIGQGQGADPA
CCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
SVVFDAVSAAVSRNADVVLVDTAGRLHNKSHLMEELAKIMRVAKKRIPEAPHEVLLVLDG
HHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TTGQNAVQQAQEFTKFVQVTGLVVTKLDGTSKGGIVLSISRDLKLPVKYIGVGEKIDDLQ
CCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCHHHH
LFDRRNFVGALLGKEEK
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]