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The map label for this gene is cynT [H]

Identifier: 78189138

GI number: 78189138

Start: 1566136

End: 1566858

Strand: Reverse

Name: cynT [H]

Synonym: Cag_1171

Alternate gene names: 78189138

Gene position: 1566858-1566136 (Counterclockwise)

Preceding gene: 78189139

Following gene: 78189137

Centisome position: 60.92

GC content: 42.46

Gene sequence:

>723_bases
ATGAAAAAACGTGCATCTGCCTTACTTCTTGCGTTAACGCTTGCAGCATCGCCACTTGTTGCTGCCGAGCATGGTAACGC
AACACACAGTAGCCATGCTGCTACCGATTCGGTTGAACCTGCGAAAGCATTAGAAATGCTTCTTGAAGGCAACCGAAATT
TTGCAACGAAAGGAAAAGTACATCATCTTGGAACAATGGCAACAAACGCACGTCGCAATGCTATTGCAACCAAACAAAAA
CCATTTGCTGTAGTTGTTGCATGTTCCGATTCTCGTGTAGCCCCTGAAATTCTTTTTGATAAAGGATTGGGAGAAATTTT
TGTTATTCGAGTAGCTGGCAATATTGTTGGATCGCATGAGCTTGGCTCCATTGAATATGCTGTTGAGCATCTTGGCGCAC
CATTAGTAATGGTACTGGGACATGAACGTTGCGGAGCTGTAACGGCAACATACGATGCCCATGTAGCCGGCACCAAAGTG
GAAGGAAATATTGGTTCACTTGTACAAGCTATTGATCCCGCCGTAACAACTACATTAACACGTAACGCTTCAGGCAAAAA
AGCTGAAGTAGTAGAACAATGTACGCTTGAAAATGTTCGTAATGTAGCAACACAAATTGCAACAACATCACCCATTATTA
AGGAAGCTATTGCGAATGGTCATGTACAAGTTGTTAAAGCATACTACGATTTAGATGATGGCAAAGTTACCGTTGTTAAG
TAA

Upstream 100 bases:

>100_bases
AATAAGAGGTTTTTATATGTTAATGAAATTGTGCTCTCTTATAACGTAATAGCATTAACAATAGGTGTTTCTATACACCA
CAATCAATGGAGACTGATTT

Downstream 100 bases:

>100_bases
CATTTAAATGTTTTAATTGCCGAACCCTTTCTTTTATGCAATGTTGTGCATAAGGAGAGGGTTCAATGGTTTATGGTGAA
AAAGAGGGGTGAAAAATTTA

Product: carbonic anhydrase family protein

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKKRASALLLALTLAASPLVAAEHGNATHSSHAATDSVEPAKALEMLLEGNRNFATKGKVHHLGTMATNARRNAIATKQK
PFAVVVACSDSRVAPEILFDKGLGEIFVIRVAGNIVGSHELGSIEYAVEHLGAPLVMVLGHERCGAVTATYDAHVAGTKV
EGNIGSLVQAIDPAVTTTLTRNASGKKAEVVEQCTLENVRNVATQIATTSPIIKEAIANGHVQVVKAYYDLDDGKVTVVK

Sequences:

>Translated_240_residues
MKKRASALLLALTLAASPLVAAEHGNATHSSHAATDSVEPAKALEMLLEGNRNFATKGKVHHLGTMATNARRNAIATKQK
PFAVVVACSDSRVAPEILFDKGLGEIFVIRVAGNIVGSHELGSIEYAVEHLGAPLVMVLGHERCGAVTATYDAHVAGTKV
EGNIGSLVQAIDPAVTTTLTRNASGKKAEVVEQCTLENVRNVATQIATTSPIIKEAIANGHVQVVKAYYDLDDGKVTVVK
>Mature_240_residues
MKKRASALLLALTLAASPLVAAEHGNATHSSHAATDSVEPAKALEMLLEGNRNFATKGKVHHLGTMATNARRNAIATKQK
PFAVVVACSDSRVAPEILFDKGLGEIFVIRVAGNIVGSHELGSIEYAVEHLGAPLVMVLGHERCGAVTATYDAHVAGTKV
EGNIGSLVQAIDPAVTTTLTRNASGKKAEVVEQCTLENVRNVATQIATTSPIIKEAIANGHVQVVKAYYDLDDGKVTVVK

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=170, Percent_Identity=30, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 25175; Mature: 25175

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRASALLLALTLAASPLVAAEHGNATHSSHAATDSVEPAKALEMLLEGNRNFATKGKV
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCE
HHLGTMATNARRNAIATKQKPFAVVVACSDSRVAPEILFDKGLGEIFVIRVAGNIVGSHE
EEHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCEECCCC
LGSIEYAVEHLGAPLVMVLGHERCGAVTATYDAHVAGTKVEGNIGSLVQAIDPAVTTTLT
CCHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEECCEECCCHHHHHHHHCCHHHHEEE
RNASGKKAEVVEQCTLENVRNVATQIATTSPIIKEAIANGHVQVVKAYYDLDDGKVTVVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCEEEEEC
>Mature Secondary Structure
MKKRASALLLALTLAASPLVAAEHGNATHSSHAATDSVEPAKALEMLLEGNRNFATKGKV
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCE
HHLGTMATNARRNAIATKQKPFAVVVACSDSRVAPEILFDKGLGEIFVIRVAGNIVGSHE
EEHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCEECCCC
LGSIEYAVEHLGAPLVMVLGHERCGAVTATYDAHVAGTKVEGNIGSLVQAIDPAVTTTLT
CCHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEECCEECCCHHHHHHHHCCHHHHEEE
RNASGKKAEVVEQCTLENVRNVATQIATTSPIIKEAIANGHVQVVKAYYDLDDGKVTVVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]