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The map label for this gene is 78189047

Identifier: 78189047

GI number: 78189047

Start: 1461357

End: 1462874

Strand: Reverse

Name: 78189047

Synonym: Cag_1080

Alternate gene names: NA

Gene position: 1462874-1461357 (Counterclockwise)

Preceding gene: 78189049

Following gene: 78189046

Centisome position: 56.88

GC content: 30.7

Gene sequence:

>1518_bases
ATGAAACCGCTACCCGTAGGCATACAAACATTCAGCAAAATAATTGAGGATGATTATTTGTACATTGATAAAACAGATAT
AGCGAAAAATATGATAGAAAAATATCAATATGTTTTTCTATCACGTCCACGCCGCTTTGGTAAAAGCCTATTTCTCGATA
CACTTCAAAATATTTTTGAAGGTAAACAAGAGCTTTTTAAAAACTTACTTATTTACAACCAATGGAATTGGAGTAGAACC
TATCCCGTTATTAAAATAAGTTTTAGTGGAGGCATACGCGATAAAGAAAGTCTGCATAAAAATCTTTTCTATATCTTAAA
AGATAATCAAGAACGACTCAATATTACTTGTGAAGAAAAAAATGATCCAAATCAATGCTTTGCTGAATTAATTAAAAAAA
CATTTCAAACATATCAAAAAAGCGTTGTTATTCTGATTGATGAGTACGATAAACCAATTCTTGATAATATTGAAAATATT
GCGGAAGCGCTCATCATTCGTGATGGAATACGAGACTTTTATACCAAAATAAAAGAGAGTGATCAATATTTGCGTTTTGT
TTTTCTTACAGGTGTTAGCAAATTTTCAAAAGTATCGCTTTTTAGTGGTTTAAATAATCTTGAAGATATTAGCCTCAATC
CCGATTTTGGTAACATTTGTGGCTATACACAACATGATGTGGATACCTCTTTTGCGCCATATCTTGAAGGTGTTGATATG
GAAGCGGTAAAACGCTGGTATAACGGCTATAACTTTCTTGGCGATAAAGTCTATAACCCATTTGATATTCTACTCTTTAT
CAAAAACCATAAGATGTTTAAAAACTATTGGTTTGAGACAGGAACACCAAAATTTTTGATTGACCTCATTAAAAAGAACC
AATATTTTGTTCCTGAATTTAATGGCTTAAAAGCCGATGAATCCTTGATTAATAGTTTTGATATTGAAAAACTCACATTG
GAAACACTTTTATTTCAAACAGGCTATTTAACCATTAAGCAATTATTGCTCTCAGATGTAGGTGTTAGTTATGAATTAGG
ATTTCCTAACAAAGAGATACAGATAAGTTTTAATAATTATATTTTGCAATCCATAACGCAAAATTCACAAAAAGAATCAA
TTCGTCATGAATTACTTGCAATTGTTAAAGCTGGAGATATTGGTAATTTAGAACAAATTATCAAACGACTTTTTGCAAGC
ATTGCGTATAATAATTTCACCAACAATTATATTGAAAGTTATGAAGGTTTTTATGCTAGTGTACTTTATGCTTATTTTGC
AAGTCTTGGGTTTGACATCATAGCTGAAGATATCACCAATAAAGGACGGATTGATTTAACACTGAGAAGCCTTGACAAAA
CCTATATATTTGAATTCAAAGTTATTGCAGAAGAGCCACTTGAGCAAATCAAGAAAATGAAATATTATGAAAAATATAAT
GGTGAACGTTATCTTATTGGTATTGTCTTTGATCCAAAAGAGCGAAACGTTAGTCAGTTTGCATGGGAAAAAATTTAA

Upstream 100 bases:

>100_bases
AGCCAAAATAAAGCGGGAATAACAACATAGCAATGGATTCTAACGCTTTTGTCGTCATAACAATCCATAATCAAAAATTC
AAAATCCATAATTTATCATT

Downstream 100 bases:

>100_bases
TGTGAATTTTATATGTTGAATTTTGGATTATCATTACAGTAGCGAAATGAAGAATCATAAATTTATCATCTATCACTTAT
CATTTATCATCAGTAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKPLPVGIQTFSKIIEDDYLYIDKTDIAKNMIEKYQYVFLSRPRRFGKSLFLDTLQNIFEGKQELFKNLLIYNQWNWSRT
YPVIKISFSGGIRDKESLHKNLFYILKDNQERLNITCEEKNDPNQCFAELIKKTFQTYQKSVVILIDEYDKPILDNIENI
AEALIIRDGIRDFYTKIKESDQYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNICGYTQHDVDTSFAPYLEGVDM
EAVKRWYNGYNFLGDKVYNPFDILLFIKNHKMFKNYWFETGTPKFLIDLIKKNQYFVPEFNGLKADESLINSFDIEKLTL
ETLLFQTGYLTIKQLLLSDVGVSYELGFPNKEIQISFNNYILQSITQNSQKESIRHELLAIVKAGDIGNLEQIIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDIIAEDITNKGRIDLTLRSLDKTYIFEFKVIAEEPLEQIKKMKYYEKYN
GERYLIGIVFDPKERNVSQFAWEKI

Sequences:

>Translated_505_residues
MKPLPVGIQTFSKIIEDDYLYIDKTDIAKNMIEKYQYVFLSRPRRFGKSLFLDTLQNIFEGKQELFKNLLIYNQWNWSRT
YPVIKISFSGGIRDKESLHKNLFYILKDNQERLNITCEEKNDPNQCFAELIKKTFQTYQKSVVILIDEYDKPILDNIENI
AEALIIRDGIRDFYTKIKESDQYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNICGYTQHDVDTSFAPYLEGVDM
EAVKRWYNGYNFLGDKVYNPFDILLFIKNHKMFKNYWFETGTPKFLIDLIKKNQYFVPEFNGLKADESLINSFDIEKLTL
ETLLFQTGYLTIKQLLLSDVGVSYELGFPNKEIQISFNNYILQSITQNSQKESIRHELLAIVKAGDIGNLEQIIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDIIAEDITNKGRIDLTLRSLDKTYIFEFKVIAEEPLEQIKKMKYYEKYN
GERYLIGIVFDPKERNVSQFAWEKI
>Mature_505_residues
MKPLPVGIQTFSKIIEDDYLYIDKTDIAKNMIEKYQYVFLSRPRRFGKSLFLDTLQNIFEGKQELFKNLLIYNQWNWSRT
YPVIKISFSGGIRDKESLHKNLFYILKDNQERLNITCEEKNDPNQCFAELIKKTFQTYQKSVVILIDEYDKPILDNIENI
AEALIIRDGIRDFYTKIKESDQYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNICGYTQHDVDTSFAPYLEGVDM
EAVKRWYNGYNFLGDKVYNPFDILLFIKNHKMFKNYWFETGTPKFLIDLIKKNQYFVPEFNGLKADESLINSFDIEKLTL
ETLLFQTGYLTIKQLLLSDVGVSYELGFPNKEIQISFNNYILQSITQNSQKESIRHELLAIVKAGDIGNLEQIIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDIIAEDITNKGRIDLTLRSLDKTYIFEFKVIAEEPLEQIKKMKYYEKYN
GERYLIGIVFDPKERNVSQFAWEKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 59297; Mature: 59297

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLPVGIQTFSKIIEDDYLYIDKTDIAKNMIEKYQYVFLSRPRRFGKSLFLDTLQNIFE
CCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GKQELFKNLLIYNQWNWSRTYPVIKISFSGGIRDKESLHKNLFYILKDNQERLNITCEEK
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEECCC
NDPNQCFAELIKKTFQTYQKSVVILIDEYDKPILDNIENIAEALIIRDGIRDFYTKIKES
CCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DQYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNICGYTQHDVDTSFAPYLEGVDM
CHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
EAVKRWYNGYNFLGDKVYNPFDILLFIKNHKMFKNYWFETGTPKFLIDLIKKNQYFVPEF
HHHHHHHCCCHHCHHCCCCCEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHCCCEECCCC
NGLKADESLINSFDIEKLTLETLLFQTGYLTIKQLLLSDVGVSYELGFPNKEIQISFNNY
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHH
ILQSITQNSQKESIRHELLAIVKAGDIGNLEQIIKRLFASIAYNNFTNNYIESYEGFYAS
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VLYAYFASLGFDIIAEDITNKGRIDLTLRSLDKTYIFEFKVIAEEPLEQIKKMKYYEKYN
HHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC
GERYLIGIVFDPKERNVSQFAWEKI
CCEEEEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MKPLPVGIQTFSKIIEDDYLYIDKTDIAKNMIEKYQYVFLSRPRRFGKSLFLDTLQNIFE
CCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GKQELFKNLLIYNQWNWSRTYPVIKISFSGGIRDKESLHKNLFYILKDNQERLNITCEEK
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEECCC
NDPNQCFAELIKKTFQTYQKSVVILIDEYDKPILDNIENIAEALIIRDGIRDFYTKIKES
CCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DQYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNICGYTQHDVDTSFAPYLEGVDM
CHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
EAVKRWYNGYNFLGDKVYNPFDILLFIKNHKMFKNYWFETGTPKFLIDLIKKNQYFVPEF
HHHHHHHCCCHHCHHCCCCCEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHCCCEECCCC
NGLKADESLINSFDIEKLTLETLLFQTGYLTIKQLLLSDVGVSYELGFPNKEIQISFNNY
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHH
ILQSITQNSQKESIRHELLAIVKAGDIGNLEQIIKRLFASIAYNNFTNNYIESYEGFYAS
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VLYAYFASLGFDIIAEDITNKGRIDLTLRSLDKTYIFEFKVIAEEPLEQIKKMKYYEKYN
HHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC
GERYLIGIVFDPKERNVSQFAWEKI
CCEEEEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]