| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189001
Identifier: 78189001
GI number: 78189001
Start: 1403907
End: 1404872
Strand: Reverse
Name: 78189001
Synonym: Cag_1034
Alternate gene names: NA
Gene position: 1404872-1403907 (Counterclockwise)
Preceding gene: 78189006
Following gene: 78188994
Centisome position: 54.62
GC content: 43.17
Gene sequence:
>966_bases ATGACAAGCAATCAACTCCCCACAACCCAACAACCCGACGACTACGATAGCCCATGGAAAGAAGCCATTGAGCACTACTT CCCCGAATTCATGGCATTTTACTTTCCCAACGCTTATACCGCTATTGATTGGTCAACACCTTACCACTTTCTTGATCAGG AACTCCGCACCATTGTGCCACAATCAGTGCAAGGAAAGCGAGTAGTTGATAAATTAGTTAAGGTGCAGCTTTTGGATGGA AAGGAGCGTTGGCTTTATATTCACATTGAGGTGCAAGGCAGACGCGAGGCTAACTTCCCAAGAAGAGTTTTCATCTGTAA CTATCGCATTTTTGATCAGTACGGAGTTCCTGTAGCAAGTTTTGTAATTCTTACCGATACTGATTACAATTGGCGACCAA CATCATACAGCTATGAATTTGCAGGCTGCAAACATACCTTGGAGTTTCCCATTGTTAAGTTGCTCGACTACGAACCACGC ATGGAAGAACTGCTTGCCTCCGACAACGCATTTGGGTTAATCACAGCAGCACATTTGCTCACCCAGAAAACCAGCGATAA TGCTTTTCATCGCCTTGACGCAAAAAAACAACTGATACTCTTGCTTTACGAAAGAGAGTGGGAGCGAGATCGAATAAAGG AACTGTTTCGCGTCCTTGATTGGTTTTTAGAACTACCAAAAGAGCTAAATCAGCAATTACAAACAGAAATTCAACAGATA GAGGAGGGACAAAAAATGAAATATATTTCCACTTTTGAGCGTTATGCTAAAGAAGAGGGACTTCTTGAGGGTATTGAAAA AGGCAAAGAAATTGGTGTTCTTGAAGGTATCGAAATGGGTAAAGCTGAAGGTCTTGAAGAAGGGTTAATGCAAGGCAGGC TTGAGGTTGCGCAGCGATTGGTAGCAAGTGGGATGGGTAAAGCAGAAGCTGCATTGTTGGCTGGCATAAGTGTTGATTTG CTGTAG
Upstream 100 bases:
>100_bases TCGAAGCAGTCGAAATGCTCGAAGCCAATGGGCAAACATTTTGCACAAAAAAACAGAAAAGCGTATATTTAACGAATCTT AATCCGTAAATATACGCCTT
Downstream 100 bases:
>100_bases GCTTAAAAACATAGGGCTGCACCCTATGTTGATGACTTTCGCCCTTTCAGGGCTTTAGCCTTTTCTTCCACCTTGTCAGA TGAACGTAGAGACGCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTSNQLPTTQQPDDYDSPWKEAIEHYFPEFMAFYFPNAYTAIDWSTPYHFLDQELRTIVPQSVQGKRVVDKLVKVQLLDG KERWLYIHIEVQGRREANFPRRVFICNYRIFDQYGVPVASFVILTDTDYNWRPTSYSYEFAGCKHTLEFPIVKLLDYEPR MEELLASDNAFGLITAAHLLTQKTSDNAFHRLDAKKQLILLLYEREWERDRIKELFRVLDWFLELPKELNQQLQTEIQQI EEGQKMKYISTFERYAKEEGLLEGIEKGKEIGVLEGIEMGKAEGLEEGLMQGRLEVAQRLVASGMGKAEAALLAGISVDL L
Sequences:
>Translated_321_residues MTSNQLPTTQQPDDYDSPWKEAIEHYFPEFMAFYFPNAYTAIDWSTPYHFLDQELRTIVPQSVQGKRVVDKLVKVQLLDG KERWLYIHIEVQGRREANFPRRVFICNYRIFDQYGVPVASFVILTDTDYNWRPTSYSYEFAGCKHTLEFPIVKLLDYEPR MEELLASDNAFGLITAAHLLTQKTSDNAFHRLDAKKQLILLLYEREWERDRIKELFRVLDWFLELPKELNQQLQTEIQQI EEGQKMKYISTFERYAKEEGLLEGIEKGKEIGVLEGIEMGKAEGLEEGLMQGRLEVAQRLVASGMGKAEAALLAGISVDL L >Mature_320_residues TSNQLPTTQQPDDYDSPWKEAIEHYFPEFMAFYFPNAYTAIDWSTPYHFLDQELRTIVPQSVQGKRVVDKLVKVQLLDGK ERWLYIHIEVQGRREANFPRRVFICNYRIFDQYGVPVASFVILTDTDYNWRPTSYSYEFAGCKHTLEFPIVKLLDYEPRM EELLASDNAFGLITAAHLLTQKTSDNAFHRLDAKKQLILLLYEREWERDRIKELFRVLDWFLELPKELNQQLQTEIQQIE EGQKMKYISTFERYAKEEGLLEGIEKGKEIGVLEGIEMGKAEGLEEGLMQGRLEVAQRLVASGMGKAEAALLAGISVDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37362; Mature: 37231
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNQLPTTQQPDDYDSPWKEAIEHYFPEFMAFYFPNAYTAIDWSTPYHFLDQELRTIVP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC QSVQGKRVVDKLVKVQLLDGKERWLYIHIEVQGRREANFPRRVFICNYRIFDQYGVPVAS CCCCHHHHHHHHHHHHEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEE FVILTDTDYNWRPTSYSYEFAGCKHTLEFPIVKLLDYEPRMEELLASDNAFGLITAAHLL EEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH TQKTSDNAFHRLDAKKQLILLLYEREWERDRIKELFRVLDWFLELPKELNQQLQTEIQQI HHCCCCCHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGQKMKYISTFERYAKEEGLLEGIEKGKEIGVLEGIEMGKAEGLEEGLMQGRLEVAQRL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCHHHHHHHHHHHHHHHH VASGMGKAEAALLAGISVDLL HHHCCCHHHHHHHHCCEEECC >Mature Secondary Structure TSNQLPTTQQPDDYDSPWKEAIEHYFPEFMAFYFPNAYTAIDWSTPYHFLDQELRTIVP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC QSVQGKRVVDKLVKVQLLDGKERWLYIHIEVQGRREANFPRRVFICNYRIFDQYGVPVAS CCCCHHHHHHHHHHHHEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEE FVILTDTDYNWRPTSYSYEFAGCKHTLEFPIVKLLDYEPRMEELLASDNAFGLITAAHLL EEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH TQKTSDNAFHRLDAKKQLILLLYEREWERDRIKELFRVLDWFLELPKELNQQLQTEIQQI HHCCCCCHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGQKMKYISTFERYAKEEGLLEGIEKGKEIGVLEGIEMGKAEGLEEGLMQGRLEVAQRL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCHHHHHHHHHHHHHHHH VASGMGKAEAALLAGISVDLL HHHCCCHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA