Click here to switch to the map view.

The map label for this gene is 78188952

Identifier: 78188952

GI number: 78188952

Start: 1328822

End: 1330063

Strand: Reverse

Name: 78188952

Synonym: Cag_0984

Alternate gene names: NA

Gene position: 1330063-1328822 (Counterclockwise)

Preceding gene: 78188959

Following gene: 78188947

Centisome position: 51.71

GC content: 49.11

Gene sequence:

>1242_bases
TTGTTATGCATTCCAGCCTCTTACGTCTTTCAAATGCCTACAGTTCTAATTGTTTCTGCTAGTCCGCTAGACCAAGACCG
TCTTCGCCTTAATGCTGAGTTCCGCGATATTCGGCACGCCCTACAACGATCCCGAAATCGCGAAGACTGGGTAATCGAAA
GCAACGAAGCGGTGACTGTTGATGATCTGCGCAGAGCTTTACTCGATTTCCGCCCGACAATAGTTCATTTCTCGGGCCAC
GGCGGCGGTCTTGACGGTCTGTGCTTCGAGAGCACCGAGGGTAGAACGAACTCAGCCGATGCCGAGTCGTTAGCAAAGCT
ATTCCATCACTTCAAAGACGATCTAAAGTGTGTTGTGCTGAACGCGTGCTATTCAAAGGTCCAAGGCGACGTCATCCGTC
AAGAAATTGACTACGTTGTTGGAATGAGCTCGGCAGTGGAGGACAAATCGGCGGCCAACTTTGCTGTAGCTTTCTATGAT
GCAGTGTTTGCTGGCACCGACTTCCGCACAGCTTTTGATCTGGGTTGCACAGCGCTTGACCTTAACAACCTACCCGATGC
TGACGTTCCTATCTTCATGACGGGATCGCACCTTAAGCCAACTGATCTTCATGACTCGGCGTATATCGCAGAAATCGAGA
AAGTTCTCTATTCATACATCAATACACCTTTTAGCGAACGTTGGAGATACACAACAACGGGTGAATTGCTACGGGCAGTA
ATGGAAAAACACTATGCCGGAAACATGCACCGACTCGTTCCAAAGGTGAGCGTTATCAGTATGAAGCAGATAGCAGATGA
ACATTGGGTTGTTGCTGTAGATGTGGTCAGTAGCCTAATGTACATGCGTATCAAGAACCGAAGCGTGTCAGTGGAATGGG
AAGCCAGCGTCGGGTTATGGAGCGTTCCGGTAAAAACCTATCTTGCCTTGGGCTCACGTGAACCCTTGTTGGCGCGCGTC
AATGCCGAACTGGACACTTACTACAACTTCGAATTCGCGAATGAGCAACATCGCTTCCAGTCAGTTTCTCTTTGCGCCGT
GAGCGGCCCCATGCTCCACGGCTATGTTGAGCGTGGCTCAAAAGTATATGAAGAGTTGATAGATATCCTTTCCGACGGAA
ACGAGCACGCAATTACGTTGGAAATAGAACAAGCCACCGATCACACAGACATGCCTTTGATCAAACGAGTCCTATCGCGG
ACCTGGATTTGCTCTCAACCTCAAGACACGAAAAATGCATAA

Upstream 100 bases:

>100_bases
TAAATAATAAGTTAACATGTTTGTTCGGCTGATGCAGGAATTGTCATTATGCAGAAAGCATCTTCTGCGTTTTATGGAAT
TAGGCAGATCAGTCTAAACA

Downstream 100 bases:

>100_bases
CCCTTCGGTCCACCGGACGCTGCGCGGCTTTATCGCGCAGCGCCAGTGACCTTCACGTTATCATTCATATTGCCAACAAA
GCAAAATTTAGAGAAGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MLCIPASYVFQMPTVLIVSASPLDQDRLRLNAEFRDIRHALQRSRNREDWVIESNEAVTVDDLRRALLDFRPTIVHFSGH
GGGLDGLCFESTEGRTNSADAESLAKLFHHFKDDLKCVVLNACYSKVQGDVIRQEIDYVVGMSSAVEDKSAANFAVAFYD
AVFAGTDFRTAFDLGCTALDLNNLPDADVPIFMTGSHLKPTDLHDSAYIAEIEKVLYSYINTPFSERWRYTTTGELLRAV
MEKHYAGNMHRLVPKVSVISMKQIADEHWVVAVDVVSSLMYMRIKNRSVSVEWEASVGLWSVPVKTYLALGSREPLLARV
NAELDTYYNFEFANEQHRFQSVSLCAVSGPMLHGYVERGSKVYEELIDILSDGNEHAITLEIEQATDHTDMPLIKRVLSR
TWICSQPQDTKNA

Sequences:

>Translated_413_residues
MLCIPASYVFQMPTVLIVSASPLDQDRLRLNAEFRDIRHALQRSRNREDWVIESNEAVTVDDLRRALLDFRPTIVHFSGH
GGGLDGLCFESTEGRTNSADAESLAKLFHHFKDDLKCVVLNACYSKVQGDVIRQEIDYVVGMSSAVEDKSAANFAVAFYD
AVFAGTDFRTAFDLGCTALDLNNLPDADVPIFMTGSHLKPTDLHDSAYIAEIEKVLYSYINTPFSERWRYTTTGELLRAV
MEKHYAGNMHRLVPKVSVISMKQIADEHWVVAVDVVSSLMYMRIKNRSVSVEWEASVGLWSVPVKTYLALGSREPLLARV
NAELDTYYNFEFANEQHRFQSVSLCAVSGPMLHGYVERGSKVYEELIDILSDGNEHAITLEIEQATDHTDMPLIKRVLSR
TWICSQPQDTKNA
>Mature_413_residues
MLCIPASYVFQMPTVLIVSASPLDQDRLRLNAEFRDIRHALQRSRNREDWVIESNEAVTVDDLRRALLDFRPTIVHFSGH
GGGLDGLCFESTEGRTNSADAESLAKLFHHFKDDLKCVVLNACYSKVQGDVIRQEIDYVVGMSSAVEDKSAANFAVAFYD
AVFAGTDFRTAFDLGCTALDLNNLPDADVPIFMTGSHLKPTDLHDSAYIAEIEKVLYSYINTPFSERWRYTTTGELLRAV
MEKHYAGNMHRLVPKVSVISMKQIADEHWVVAVDVVSSLMYMRIKNRSVSVEWEASVGLWSVPVKTYLALGSREPLLARV
NAELDTYYNFEFANEQHRFQSVSLCAVSGPMLHGYVERGSKVYEELIDILSDGNEHAITLEIEQATDHTDMPLIKRVLSR
TWICSQPQDTKNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46543; Mature: 46543

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCIPASYVFQMPTVLIVSASPLDQDRLRLNAEFRDIRHALQRSRNREDWVIESNEAVTV
CEECCHHHHHHCCEEEEEECCCCCHHHHEECCHHHHHHHHHHHCCCCCCCEEECCCEEEH
DDLRRALLDFRPTIVHFSGHGGGLDGLCFESTEGRTNSADAESLAKLFHHFKDDLKCVVL
HHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEEHH
NACYSKVQGDVIRQEIDYVVGMSSAVEDKSAANFAVAFYDAVFAGTDFRTAFDLGCTALD
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEHEEHHHHHCCCCCCHHHHCCCEEEE
LNNLPDADVPIFMTGSHLKPTDLHDSAYIAEIEKVLYSYINTPFSERWRYTTTGELLRAV
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH
MEKHYAGNMHRLVPKVSVISMKQIADEHWVVAVDVVSSLMYMRIKNRSVSVEWEASVGLW
HHHHHCCCHHHHHCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCEE
SVPVKTYLALGSREPLLARVNAELDTYYNFEFANEQHRFQSVSLCAVSGPMLHGYVERGS
ECCHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHEEEEEECCCHHHHHHHHHH
KVYEELIDILSDGNEHAITLEIEQATDHTDMPLIKRVLSRTWICSQPQDTKNA
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLCIPASYVFQMPTVLIVSASPLDQDRLRLNAEFRDIRHALQRSRNREDWVIESNEAVTV
CEECCHHHHHHCCEEEEEECCCCCHHHHEECCHHHHHHHHHHHCCCCCCCEEECCCEEEH
DDLRRALLDFRPTIVHFSGHGGGLDGLCFESTEGRTNSADAESLAKLFHHFKDDLKCVVL
HHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEEHH
NACYSKVQGDVIRQEIDYVVGMSSAVEDKSAANFAVAFYDAVFAGTDFRTAFDLGCTALD
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEHEEHHHHHCCCCCCHHHHCCCEEEE
LNNLPDADVPIFMTGSHLKPTDLHDSAYIAEIEKVLYSYINTPFSERWRYTTTGELLRAV
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH
MEKHYAGNMHRLVPKVSVISMKQIADEHWVVAVDVVSSLMYMRIKNRSVSVEWEASVGLW
HHHHHCCCHHHHHCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCEE
SVPVKTYLALGSREPLLARVNAELDTYYNFEFANEQHRFQSVSLCAVSGPMLHGYVERGS
ECCHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHEEEEEECCCHHHHHHHHHH
KVYEELIDILSDGNEHAITLEIEQATDHTDMPLIKRVLSRTWICSQPQDTKNA
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA