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The map label for this gene is 78188856

Identifier: 78188856

GI number: 78188856

Start: 1217353

End: 1217886

Strand: Reverse

Name: 78188856

Synonym: Cag_0886

Alternate gene names: NA

Gene position: 1217886-1217353 (Counterclockwise)

Preceding gene: 78188857

Following gene: 78188855

Centisome position: 47.35

GC content: 50.75

Gene sequence:

>534_bases
ATGAGAAAGAAAAGGGCTGGCAGACCGCAACATTGCCGTTGTGTACAGGATTTGCCGAAAGTAACCTGCTTTACTCCCTC
GGGCGTTGCGCCTGAAGCGGTGGAGCAGGTGTTGATGACGGTTGATGAGCTTGAGGCAATGCGCTTAGCTGATCGTGATG
GATTGTACCATGCTGATGCCGCCATGCAAATGAAGGTTTCGCGCCCAACTTTTGGGCGTATTTTGGAGTCGGGGCGACGT
AAAGTTGCCGATGCCTTAGTTGGCGGTAAGCAAATTTGCATTAAAGGGGGAACGGTGCTTGCCGTGTGCGATAGCATTCC
AACCGAGCGCCCCGATATTTGCTTATGCCCAACGTGTGGACGTGAATTTCCGCATATTAAAGGTGTGCCCTGCCGCAATA
GTATCTGCCCTGATTGCAATGAACCCTTACAGCGCAAAGGTGGTTGTTTGTCGGATGAGGAGAGTGATGAACAGGAAAAT
GAACAACGCACGGTGGGTTATCCCGAAAGTGAAGAGGAGTTAGAGATAGAATGA

Upstream 100 bases:

>100_bases
TTTAGTAAGTGCAGCGAACCTTTGTGCCGTTAAAAAGCACATTCTTGAACCACCTGAGTTTGAAGTAAAAACCGTTGTTC
GCTAAGCCGTTTTTATTCTT

Downstream 100 bases:

>100_bases
TGTCGTCAAGTTATAGTTTAGAGAAGTTTAATAGAGAAGCTGCCACTTGGGATGAAAAGCCACGTCGGCGCTTGGTGGCG
AAAGCTGTGGCACATGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRKKRAGRPQHCRCVQDLPKVTCFTPSGVAPEAVEQVLMTVDELEAMRLADRDGLYHADAAMQMKVSRPTFGRILESGRR
KVADALVGGKQICIKGGTVLAVCDSIPTERPDICLCPTCGREFPHIKGVPCRNSICPDCNEPLQRKGGCLSDEESDEQEN
EQRTVGYPESEEELEIE

Sequences:

>Translated_177_residues
MRKKRAGRPQHCRCVQDLPKVTCFTPSGVAPEAVEQVLMTVDELEAMRLADRDGLYHADAAMQMKVSRPTFGRILESGRR
KVADALVGGKQICIKGGTVLAVCDSIPTERPDICLCPTCGREFPHIKGVPCRNSICPDCNEPLQRKGGCLSDEESDEQEN
EQRTVGYPESEEELEIE
>Mature_177_residues
MRKKRAGRPQHCRCVQDLPKVTCFTPSGVAPEAVEQVLMTVDELEAMRLADRDGLYHADAAMQMKVSRPTFGRILESGRR
KVADALVGGKQICIKGGTVLAVCDSIPTERPDICLCPTCGREFPHIKGVPCRNSICPDCNEPLQRKGGCLSDEESDEQEN
EQRTVGYPESEEELEIE

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y886_CHLCH (Q3AS74)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379194.1
- STRING:   Q3AS74
- GeneID:   3747347
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_0886
- eggNOG:   COG1342
- HOGENOM:   HBG513201
- OMA:   GGKTICI
- ProtClustDB:   CLSK637532
- BioCyc:   CCHL340177:CAG_0886-MONOMER
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 19575; Mature: 19575

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKRAGRPQHCRCVQDLPKVTCFTPSGVAPEAVEQVLMTVDELEAMRLADRDGLYHADA
CCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
AMQMKVSRPTFGRILESGRRKVADALVGGKQICIKGGTVLAVCDSIPTERPDICLCPTCG
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCEEECCCCC
REFPHIKGVPCRNSICPDCNEPLQRKGGCLSDEESDEQENEQRTVGYPESEEELEIE
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKRAGRPQHCRCVQDLPKVTCFTPSGVAPEAVEQVLMTVDELEAMRLADRDGLYHADA
CCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
AMQMKVSRPTFGRILESGRRKVADALVGGKQICIKGGTVLAVCDSIPTERPDICLCPTCG
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCEEECCCCC
REFPHIKGVPCRNSICPDCNEPLQRKGGCLSDEESDEQENEQRTVGYPESEEELEIE
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA