| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188791
Identifier: 78188791
GI number: 78188791
Start: 1145221
End: 1146225
Strand: Reverse
Name: 78188791
Synonym: Cag_0820
Alternate gene names: NA
Gene position: 1146225-1145221 (Counterclockwise)
Preceding gene: 78188792
Following gene: 78188790
Centisome position: 44.56
GC content: 39.3
Gene sequence:
>1005_bases ATGGCTACTCGTAAACTTATTACGTTCGATTGGGCAATGAAGCGCCTGCTTCGTAGTAAAGCCAACTTCGATATTTTAGA AGGCTTTTTAAGCGAACTGTTGGGCGAGGATATTACGATACTTGATATTCTTGAAAGTGAAAGCAATCAAGAGAACAAAG AGTATAAATACAATCGTCTCGACCTCAAGGTTAAAAACAGCAAAGGCGAGCTTATTATTATTGAAGTGCAATATGAACGC GAGTACGATTACTTTCAACGCATGTTGTACGGCGCATCTCGCGTTATTACTGAACATCAAAAACTTAGTGAACCATATTC TACCATTCCAACGGTTATCTCTATTAACATTCTGTACTTTACGCTTGGTGAAGGCAGCGACTATATTTATTACGGCACTA CAAAATTTGTAGGAATGCACAACCGTGATGTTTTGCATTTAAGTAAAGAACAACGGGAGAAATATGGTAAACGTGAGGTA AGCGACATTTATCCAAAATATTACTTATTGCAAATCAATAATTTTAACAATGTAGCTAAAACCTCCCTTGATGAATGGAT ATATTTTCTTAAGAATGCAGAAATTCCAGAGAATTTTAATGCGAAAGGAATAAAAAAAGCCAAAGAATCGTTTGACTTTA TTAGCATGACTCCCGAAGAGCAGGAAGCATTTCTTAGCTATCAAGATGCGTTGCGCGATCAAGCAAGTTATTTTGAAACC ACCTACGAAATTCCTTTTGAACAAGGCTTAAAAAAAGGTATTCGCAAAGGACGAAAAGAAGGCAAAGAGCAAGGTTTGCG CGAAGGGAAAAAGCTTGGTTTACAAGAAGGCGTGCTAAAAGGCAAAGAGTTAGGCTTGCAGGAAGGCAAAGAGCTGGGGT TGCAAGAGGGTGTGCTAAAAGGCAAACTTGAAATTGCTCGCAAGCTGATGGCAAAAGGGATGAGCGCTGAAGAGGCGGCA GGTATTGCAGGGGTGAATATTGGGTTGCTGGAAAGAAATGATTGA
Upstream 100 bases:
>100_bases TTAGTTCCGCTTTTTTTCTACCCTTCTTTTAGCTGAAGTATTACCCTGTACTTATAAAATATGTAAATTCAGCTTAGTCA ACAATCACTATCCACTACCG
Downstream 100 bases:
>100_bases TGAAATGAGAGATGGCAAGACGTAGGGGCGTATTCCATATACGCCCTGACGGGGTGGTTTGTTTTACCTTTTTTCGATGG TCTCTCTTTTGTTCTTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYER EYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREV SDIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAA GIAGVNIGLLERND
Sequences:
>Translated_334_residues MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYER EYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREV SDIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAA GIAGVNIGLLERND >Mature_333_residues ATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYERE YDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVS DIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFETT YEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAAG IAGVNIGLLERND
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38494; Mature: 38363
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRL CCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEE DLKVKNSKGELIIIEVQYEREYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYF EEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEEEEE TLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVSDIYPKYYLLQINNFNNVAK EECCCCCEEEECCEEEEECCCCCEEECCHHHHHHHCCHHHHHHCCCEEEEEECCCCCHHH TSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCHHHHHHCCHHHHHHH GKLEIARKLMAKGMSAEEAAGIAGVNIGLLERND HHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCC >Mature Secondary Structure ATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRL CCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEE DLKVKNSKGELIIIEVQYEREYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYF EEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEEEEE TLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVSDIYPKYYLLQINNFNNVAK EECCCCCEEEECCEEEEECCCCCEEECCHHHHHHHCCHHHHHHCCCEEEEEECCCCCHHH TSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCHHHHHHCCHHHHHHH GKLEIARKLMAKGMSAEEAAGIAGVNIGLLERND HHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA