Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

Click here to switch to the map view.

The map label for this gene is 78188791

Identifier: 78188791

GI number: 78188791

Start: 1145221

End: 1146225

Strand: Reverse

Name: 78188791

Synonym: Cag_0820

Alternate gene names: NA

Gene position: 1146225-1145221 (Counterclockwise)

Preceding gene: 78188792

Following gene: 78188790

Centisome position: 44.56

GC content: 39.3

Gene sequence:

>1005_bases
ATGGCTACTCGTAAACTTATTACGTTCGATTGGGCAATGAAGCGCCTGCTTCGTAGTAAAGCCAACTTCGATATTTTAGA
AGGCTTTTTAAGCGAACTGTTGGGCGAGGATATTACGATACTTGATATTCTTGAAAGTGAAAGCAATCAAGAGAACAAAG
AGTATAAATACAATCGTCTCGACCTCAAGGTTAAAAACAGCAAAGGCGAGCTTATTATTATTGAAGTGCAATATGAACGC
GAGTACGATTACTTTCAACGCATGTTGTACGGCGCATCTCGCGTTATTACTGAACATCAAAAACTTAGTGAACCATATTC
TACCATTCCAACGGTTATCTCTATTAACATTCTGTACTTTACGCTTGGTGAAGGCAGCGACTATATTTATTACGGCACTA
CAAAATTTGTAGGAATGCACAACCGTGATGTTTTGCATTTAAGTAAAGAACAACGGGAGAAATATGGTAAACGTGAGGTA
AGCGACATTTATCCAAAATATTACTTATTGCAAATCAATAATTTTAACAATGTAGCTAAAACCTCCCTTGATGAATGGAT
ATATTTTCTTAAGAATGCAGAAATTCCAGAGAATTTTAATGCGAAAGGAATAAAAAAAGCCAAAGAATCGTTTGACTTTA
TTAGCATGACTCCCGAAGAGCAGGAAGCATTTCTTAGCTATCAAGATGCGTTGCGCGATCAAGCAAGTTATTTTGAAACC
ACCTACGAAATTCCTTTTGAACAAGGCTTAAAAAAAGGTATTCGCAAAGGACGAAAAGAAGGCAAAGAGCAAGGTTTGCG
CGAAGGGAAAAAGCTTGGTTTACAAGAAGGCGTGCTAAAAGGCAAAGAGTTAGGCTTGCAGGAAGGCAAAGAGCTGGGGT
TGCAAGAGGGTGTGCTAAAAGGCAAACTTGAAATTGCTCGCAAGCTGATGGCAAAAGGGATGAGCGCTGAAGAGGCGGCA
GGTATTGCAGGGGTGAATATTGGGTTGCTGGAAAGAAATGATTGA

Upstream 100 bases:

>100_bases
TTAGTTCCGCTTTTTTTCTACCCTTCTTTTAGCTGAAGTATTACCCTGTACTTATAAAATATGTAAATTCAGCTTAGTCA
ACAATCACTATCCACTACCG

Downstream 100 bases:

>100_bases
TGAAATGAGAGATGGCAAGACGTAGGGGCGTATTCCATATACGCCCTGACGGGGTGGTTTGTTTTACCTTTTTTCGATGG
TCTCTCTTTTGTTCTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYER
EYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREV
SDIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET
TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAA
GIAGVNIGLLERND

Sequences:

>Translated_334_residues
MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYER
EYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREV
SDIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET
TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAA
GIAGVNIGLLERND
>Mature_333_residues
ATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRLDLKVKNSKGELIIIEVQYERE
YDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYFTLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVS
DIYPKYYLLQINNFNNVAKTSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFETT
YEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLKGKLEIARKLMAKGMSAEEAAG
IAGVNIGLLERND

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38494; Mature: 38363

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRL
CCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEE
DLKVKNSKGELIIIEVQYEREYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYF
EEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEEEEE
TLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVSDIYPKYYLLQINNFNNVAK
EECCCCCEEEECCEEEEECCCCCEEECCHHHHHHHCCHHHHHHCCCEEEEEECCCCCHHH
TSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCHHHHHHCCHHHHHHH
GKLEIARKLMAKGMSAEEAAGIAGVNIGLLERND
HHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure 
ATRKLITFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNQENKEYKYNRL
CCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEE
DLKVKNSKGELIIIEVQYEREYDYFQRMLYGASRVITEHQKLSEPYSTIPTVISINILYF
EEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEEEEE
TLGEGSDYIYYGTTKFVGMHNRDVLHLSKEQREKYGKREVSDIYPKYYLLQINNFNNVAK
EECCCCCEEEECCEEEEECCCCCEEECCHHHHHHHCCHHHHHHCCCEEEEEECCCCCHHH
TSLDEWIYFLKNAEIPENFNAKGIKKAKESFDFISMTPEEQEAFLSYQDALRDQASYFET
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
TYEIPFEQGLKKGIRKGRKEGKEQGLREGKKLGLQEGVLKGKELGLQEGKELGLQEGVLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCHHHHHHCCHHHHHHH
GKLEIARKLMAKGMSAEEAAGIAGVNIGLLERND
HHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA