| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188696
Identifier: 78188696
GI number: 78188696
Start: 994284
End: 995063
Strand: Reverse
Name: 78188696
Synonym: Cag_0720
Alternate gene names: NA
Gene position: 995063-994284 (Counterclockwise)
Preceding gene: 78188697
Following gene: 78188695
Centisome position: 38.69
GC content: 29.49
Gene sequence:
>780_bases ATGAAAAAAGTTATTGCATTTCACATTGCCGAAAGCATTGATATTAAACGGTTTTGGAAAGGATTTACAGACACCGAAAA TCATATGTCATCTTTGGATATTTTTTATACCAATGATAAAGATCAATATCTATATTTATTAGCTTATGGTGTTGTTGTAT TTGTTGGTTATGATGAACTAAAAATGAGCGATATGATAGATTACTTAAAACCGCTCTGCAAAAACTTGCTAACCGAAAAA ATGCGGGAAGAATTTATTATAAATACAACAACAAATAAAGATGCTTTTGAATACAACGAAATACACATCAGTAATTCCAA TCCTAATGTTATACGAATTATTATGCTCAACGTTGCACAATCAGTTGCGCTTGATTATTTCTCGAAACTCGCAGAAGATT TAATGATTGAAACTACCATTTATACCCAACAACTTGAAAAATACGGAAAGATTAATATATCAATAAAAAGATTACAAATG TTTATTGGTAAAGTATTAAATATAAAAAATAGAATTGCTGAAAATTTTTATATTCTCGATTCGCCCGAAGAAACGTGGGA AGACGAGTACCTAAGCAAAATTGACTTTGGCTTACGAAAAACATTTGATGTGAAAATTCGATTTCGAGAAATAGATTATC AATTACAAATTATTCGCGATAACCTCGATCTATTTAAAGATCTCATTCAACATTGGAAAAGCAATATGCTTGAGTGGGTC ATTATTTTACTAATTCTGGTAGAGGTTGTTAATTTGTTTGTAGAAAAATTTTCACACTAA
Upstream 100 bases:
>100_bases AATAAAGAACCCCACCACAAGCAGCGGGGTATTTTGAAGACAATTCTATAATACTTTACGCCTCAAGAGGCAGAGAATAT GACCCATAGAGATTAAAATC
Downstream 100 bases:
>100_bases AACTCTACTGTCATGTCAAGCTTATAATGACGAATGAGTCATTCCCGCGAAGGCGGGAATCCATTTTACAATCCAGCAAA CAGCCGTTAAATTGTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKKVIAFHIAESIDIKRFWKGFTDTENHMSSLDIFYTNDKDQYLYLLAYGVVVFVGYDELKMSDMIDYLKPLCKNLLTEK MREEFIINTTTNKDAFEYNEIHISNSNPNVIRIIMLNVAQSVALDYFSKLAEDLMIETTIYTQQLEKYGKINISIKRLQM FIGKVLNIKNRIAENFYILDSPEETWEDEYLSKIDFGLRKTFDVKIRFREIDYQLQIIRDNLDLFKDLIQHWKSNMLEWV IILLILVEVVNLFVEKFSH
Sequences:
>Translated_259_residues MKKVIAFHIAESIDIKRFWKGFTDTENHMSSLDIFYTNDKDQYLYLLAYGVVVFVGYDELKMSDMIDYLKPLCKNLLTEK MREEFIINTTTNKDAFEYNEIHISNSNPNVIRIIMLNVAQSVALDYFSKLAEDLMIETTIYTQQLEKYGKINISIKRLQM FIGKVLNIKNRIAENFYILDSPEETWEDEYLSKIDFGLRKTFDVKIRFREIDYQLQIIRDNLDLFKDLIQHWKSNMLEWV IILLILVEVVNLFVEKFSH >Mature_259_residues MKKVIAFHIAESIDIKRFWKGFTDTENHMSSLDIFYTNDKDQYLYLLAYGVVVFVGYDELKMSDMIDYLKPLCKNLLTEK MREEFIINTTTNKDAFEYNEIHISNSNPNVIRIIMLNVAQSVALDYFSKLAEDLMIETTIYTQQLEKYGKINISIKRLQM FIGKVLNIKNRIAENFYILDSPEETWEDEYLSKIDFGLRKTFDVKIRFREIDYQLQIIRDNLDLFKDLIQHWKSNMLEWV IILLILVEVVNLFVEKFSH
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320203, Length=217, Percent_Identity=27.1889400921659, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30879; Mature: 30879
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVIAFHIAESIDIKRFWKGFTDTENHMSSLDIFYTNDKDQYLYLLAYGVVVFVGYDEL CCCEEEEHHHHHCCHHHHHCCCCCCCHHHHHEEEEEECCCCCEEHHHHHHHHHEECCHHH KMSDMIDYLKPLCKNLLTEKMREEFIINTTTNKDAFEYNEIHISNSNPNVIRIIMLNVAQ HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCCCEEEEEEHHHHH SVALDYFSKLAEDLMIETTIYTQQLEKYGKINISIKRLQMFIGKVLNIKNRIAENFYILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC SPEETWEDEYLSKIDFGLRKTFDVKIRFREIDYQLQIIRDNLDLFKDLIQHWKSNMLEWV CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECEEEEHHHHHHHHHHHHHHHHHHHHHHHH IILLILVEVVNLFVEKFSH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVIAFHIAESIDIKRFWKGFTDTENHMSSLDIFYTNDKDQYLYLLAYGVVVFVGYDEL CCCEEEEHHHHHCCHHHHHCCCCCCCHHHHHEEEEEECCCCCEEHHHHHHHHHEECCHHH KMSDMIDYLKPLCKNLLTEKMREEFIINTTTNKDAFEYNEIHISNSNPNVIRIIMLNVAQ HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCCCEEEEEEHHHHH SVALDYFSKLAEDLMIETTIYTQQLEKYGKINISIKRLQMFIGKVLNIKNRIAENFYILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC SPEETWEDEYLSKIDFGLRKTFDVKIRFREIDYQLQIIRDNLDLFKDLIQHWKSNMLEWV CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECEEEEHHHHHHHHHHHHHHHHHHHHHHHH IILLILVEVVNLFVEKFSH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA