Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78188663

Identifier: 78188663

GI number: 78188663

Start: 956189

End: 957127

Strand: Reverse

Name: 78188663

Synonym: Cag_0686

Alternate gene names: NA

Gene position: 957127-956189 (Counterclockwise)

Preceding gene: 78188664

Following gene: 78188660

Centisome position: 37.21

GC content: 42.39

Gene sequence:

>939_bases
ATGATAAACAACCTATTCCTAACGAACCAGCGCGACAACTACGACAGCCCTTGGAAAGAGGCAATTGAGCACTATTTTCT
TGAGTTCATGGCATTTTTCTTTCCCGCGGCATACGCCTCTATTGATTGGTCAAAACCCTACCACTTTCTCAATGAAGAGT
TGCGTGCTATTATACCTGATGCTGAAGTAAGCAACCGTGTGGTTGATAAGTTAGTACAAGTACAGCTCTTGGATGGTATG
GAGAGTTGGCTTTATATTCATATTGAGGTGCAAAGTTTTTGGGAGGTAAACTTTCCTGAAAGAATATTTGTTTATTTTTA
TCGCATATATGACAAATACGGAAAAGCCGTTGCCAACTTTGTCGTGCTTGCCGACCAGCATAGTAATTGGCGTCCAACAT
CATATACTATGGAAACCATTGGCAGCAAACTTTCGTTAGATTTTTCAGTGGTAAAGCTGTTGGATTTTGAGCCACGCTTG
CAGGAGTTGCTTGTTTCCGACAATGTGTTTGGTGTAATAACAGCCGCACATTTGCTCACACAGAAAACCAAAAATAAAGT
AAAGCAGCGCTACGAAGCAAAAAAGCTTTTAATGCAATTATTACTGCAACGCCAGTGGGAGCAGGAACGCATTAATGAGC
TCATACGGGTAATTGATTGGTTGTTAAAGCTACCAAAAGAGTTGCGGCAAAAATTAAAAGCAGAAATACATAACATGGAG
GAGGAACAAAAGATGAAATATGTTACAAGTTTTGAGCGCGATGCAATGGAAGAAGGTCGAGAGATGGGGCTTGTAGAAGG
TATGGAAAAAGGTAAAGCCGAAGGTCTTGAAGAGGGATTACTGAAGGGCAGGCTTGAGGTTGCAGAGAGGTTGGTTGCAA
GCGGAATGAGTAAAGCGGAAGCGGCGCTGTTAGCGGGGGTAAGTGTGGAGATGCTGTAA

Upstream 100 bases:

>100_bases
TAACTTTCAATTTTCAATTCCCACTTAATACCCAGTACTTTTTATTTTTTATCCCAGATAGCGTATATTAAGCGAATATT
AATTCATAAATATACGCCTG

Downstream 100 bases:

>100_bases
AGCAATTTCTACAATTCCCCTCCTTTGGAGGGGTGCCCGAAGGGCGGGGTGGTTTTTCGTGCAAATCCTGATTCAGACAA
AAGGGCAGCCACAGAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM
ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL
QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME
EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML

Sequences:

>Translated_312_residues
MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM
ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL
QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME
EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML
>Mature_312_residues
MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM
ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL
QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME
EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36546; Mature: 36546

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
AEVSNRVVDKLVQVQLLDGMESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANF
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRLQELLVSDNVFGVITAAHLLT
HEEECCCCCCCCCCHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
QKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH
AALLAGVSVEML
HHHHHCCHHCCC
>Mature Secondary Structure
MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
AEVSNRVVDKLVQVQLLDGMESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANF
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRLQELLVSDNVFGVITAAHLLT
HEEECCCCCCCCCCHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
QKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH
AALLAGVSVEML
HHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA