| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188663
Identifier: 78188663
GI number: 78188663
Start: 956189
End: 957127
Strand: Reverse
Name: 78188663
Synonym: Cag_0686
Alternate gene names: NA
Gene position: 957127-956189 (Counterclockwise)
Preceding gene: 78188664
Following gene: 78188660
Centisome position: 37.21
GC content: 42.39
Gene sequence:
>939_bases ATGATAAACAACCTATTCCTAACGAACCAGCGCGACAACTACGACAGCCCTTGGAAAGAGGCAATTGAGCACTATTTTCT TGAGTTCATGGCATTTTTCTTTCCCGCGGCATACGCCTCTATTGATTGGTCAAAACCCTACCACTTTCTCAATGAAGAGT TGCGTGCTATTATACCTGATGCTGAAGTAAGCAACCGTGTGGTTGATAAGTTAGTACAAGTACAGCTCTTGGATGGTATG GAGAGTTGGCTTTATATTCATATTGAGGTGCAAAGTTTTTGGGAGGTAAACTTTCCTGAAAGAATATTTGTTTATTTTTA TCGCATATATGACAAATACGGAAAAGCCGTTGCCAACTTTGTCGTGCTTGCCGACCAGCATAGTAATTGGCGTCCAACAT CATATACTATGGAAACCATTGGCAGCAAACTTTCGTTAGATTTTTCAGTGGTAAAGCTGTTGGATTTTGAGCCACGCTTG CAGGAGTTGCTTGTTTCCGACAATGTGTTTGGTGTAATAACAGCCGCACATTTGCTCACACAGAAAACCAAAAATAAAGT AAAGCAGCGCTACGAAGCAAAAAAGCTTTTAATGCAATTATTACTGCAACGCCAGTGGGAGCAGGAACGCATTAATGAGC TCATACGGGTAATTGATTGGTTGTTAAAGCTACCAAAAGAGTTGCGGCAAAAATTAAAAGCAGAAATACATAACATGGAG GAGGAACAAAAGATGAAATATGTTACAAGTTTTGAGCGCGATGCAATGGAAGAAGGTCGAGAGATGGGGCTTGTAGAAGG TATGGAAAAAGGTAAAGCCGAAGGTCTTGAAGAGGGATTACTGAAGGGCAGGCTTGAGGTTGCAGAGAGGTTGGTTGCAA GCGGAATGAGTAAAGCGGAAGCGGCGCTGTTAGCGGGGGTAAGTGTGGAGATGCTGTAA
Upstream 100 bases:
>100_bases TAACTTTCAATTTTCAATTCCCACTTAATACCCAGTACTTTTTATTTTTTATCCCAGATAGCGTATATTAAGCGAATATT AATTCATAAATATACGCCTG
Downstream 100 bases:
>100_bases AGCAATTTCTACAATTCCCCTCCTTTGGAGGGGTGCCCGAAGGGCGGGGTGGTTTTTCGTGCAAATCCTGATTCAGACAA AAGGGCAGCCACAGAGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML
Sequences:
>Translated_312_residues MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML >Mature_312_residues MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPDAEVSNRVVDKLVQVQLLDGM ESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANFVVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRL QELLVSDNVFGVITAAHLLTQKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAEAALLAGVSVEML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36546; Mature: 36546
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPD CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC AEVSNRVVDKLVQVQLLDGMESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANF CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRLQELLVSDNVFGVITAAHLLT HEEECCCCCCCCCCHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH QKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH AALLAGVSVEML HHHHHCCHHCCC >Mature Secondary Structure MINNLFLTNQRDNYDSPWKEAIEHYFLEFMAFFFPAAYASIDWSKPYHFLNEELRAIIPD CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC AEVSNRVVDKLVQVQLLDGMESWLYIHIEVQSFWEVNFPERIFVYFYRIYDKYGKAVANF CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VVLADQHSNWRPTSYTMETIGSKLSLDFSVVKLLDFEPRLQELLVSDNVFGVITAAHLLT HEEECCCCCCCCCCHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH QKTKNKVKQRYEAKKLLMQLLLQRQWEQERINELIRVIDWLLKLPKELRQKLKAEIHNME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EEQKMKYVTSFERDAMEEGREMGLVEGMEKGKAEGLEEGLLKGRLEVAERLVASGMSKAE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH AALLAGVSVEML HHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA