| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
Click here to switch to the map view.
The map label for this gene is 78188577
Identifier: 78188577
GI number: 78188577
Start: 702757
End: 703590
Strand: Reverse
Name: 78188577
Synonym: Cag_0599
Alternate gene names: NA
Gene position: 703590-702757 (Counterclockwise)
Preceding gene: 78188578
Following gene: 78188576
Centisome position: 27.35
GC content: 31.41
Gene sequence:
>834_bases ATGGAAAATTTTGAAAAAATAAAAAAAATTCTGACTTCTAATTTTGAAATTGAATTGTTTGAAGCAGCATTGGCTAGCTT AAATGACAAGTCGAACAGATTACGGTTTAACAATTTTGCTTACAGTATCAGGGAATTATCAAGACACTTCCTGTATTCTT TATCACCAGAATTAAATATTAAGAATTGTAGGTGGTATAAAACGGAAACAAACGACGATAAACCTACAAGAGCTCAAAGA GTTAGATATGCAATACAAGGTGGCATTAGTGACGAATTGCTGGAAGACTGGAGTTTTGACATTCTGGGATTAGCCGATAC AATAAAATCGGTCGTGAGTTCTATAAATTCTCTCAACAAATACACACACATTAATCCTGAAGTTTTTGATTTAAAAGATG AAGAAGTTAAAGAGAAAAGTATTTTGGTTCTAGAAACGTTCAGTAAATTTGTTGAAACAATTAAAGAATACAGAGAAGAA TTGAAAAAATTTTTAGATGGACATATTGAAAACCATATGATTAACTCTGTTATTTCTAACTTTTTTAAAAATGTCGACTG TTTGGCGCCTCACCATTCATTAGAATATTGTGAAGTTTCCGATTATCATATTTCTGAAATAAATGACAAAAAAATAGTAG TAAACGTTACTGGGGATTTACATGTAGTTTTGCAATATGGTTCTTCTAGTGACAGGCGTGAAGGAGATGGGCTCGATCTA AACGAAAATTTTCCTTTTGAGACTAAAATTAGATATGAAATATCTGAAGACTTTCCTTCAGACAATCATGAAGTTGATGA TTATGATGTAGATACGTCAAAGTGGTATGAATGA
Upstream 100 bases:
>100_bases ATAAATGAAAAATATAAACAATTGCTTTTATCCCTCTGATTTGGTGGTATAAAAACAATGAACTATATACAGACGTTAGT GGTAATATTAAAAAACACCC
Downstream 100 bases:
>100_bases AATAAAATATTACAGCCAAAAAATGCTATAGCAAATGCGAGTTTTCGTGTTCGTTGAAACATTTGAAATCTTTACATACA TTTGTGCTGACAGACAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MENFEKIKKILTSNFEIELFEAALASLNDKSNRLRFNNFAYSIRELSRHFLYSLSPELNIKNCRWYKTETNDDKPTRAQR VRYAIQGGISDELLEDWSFDILGLADTIKSVVSSINSLNKYTHINPEVFDLKDEEVKEKSILVLETFSKFVETIKEYREE LKKFLDGHIENHMINSVISNFFKNVDCLAPHHSLEYCEVSDYHISEINDKKIVVNVTGDLHVVLQYGSSSDRREGDGLDL NENFPFETKIRYEISEDFPSDNHEVDDYDVDTSKWYE
Sequences:
>Translated_277_residues MENFEKIKKILTSNFEIELFEAALASLNDKSNRLRFNNFAYSIRELSRHFLYSLSPELNIKNCRWYKTETNDDKPTRAQR VRYAIQGGISDELLEDWSFDILGLADTIKSVVSSINSLNKYTHINPEVFDLKDEEVKEKSILVLETFSKFVETIKEYREE LKKFLDGHIENHMINSVISNFFKNVDCLAPHHSLEYCEVSDYHISEINDKKIVVNVTGDLHVVLQYGSSSDRREGDGLDL NENFPFETKIRYEISEDFPSDNHEVDDYDVDTSKWYE >Mature_277_residues MENFEKIKKILTSNFEIELFEAALASLNDKSNRLRFNNFAYSIRELSRHFLYSLSPELNIKNCRWYKTETNDDKPTRAQR VRYAIQGGISDELLEDWSFDILGLADTIKSVVSSINSLNKYTHINPEVFDLKDEEVKEKSILVLETFSKFVETIKEYREE LKKFLDGHIENHMINSVISNFFKNVDCLAPHHSLEYCEVSDYHISEINDKKIVVNVTGDLHVVLQYGSSSDRREGDGLDL NENFPFETKIRYEISEDFPSDNHEVDDYDVDTSKWYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32437; Mature: 32437
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFEKIKKILTSNFEIELFEAALASLNDKSNRLRFNNFAYSIRELSRHFLYSLSPELNI CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC KNCRWYKTETNDDKPTRAQRVRYAIQGGISDELLEDWSFDILGLADTIKSVVSSINSLNK CCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YTHINPEVFDLKDEEVKEKSILVLETFSKFVETIKEYREELKKFLDGHIENHMINSVISN HCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFKNVDCLAPHHSLEYCEVSDYHISEINDKKIVVNVTGDLHVVLQYGSSSDRREGDGLDL HHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCC NENFPFETKIRYEISEDFPSDNHEVDDYDVDTSKWYE CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MENFEKIKKILTSNFEIELFEAALASLNDKSNRLRFNNFAYSIRELSRHFLYSLSPELNI CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC KNCRWYKTETNDDKPTRAQRVRYAIQGGISDELLEDWSFDILGLADTIKSVVSSINSLNK CCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YTHINPEVFDLKDEEVKEKSILVLETFSKFVETIKEYREELKKFLDGHIENHMINSVISN HCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFKNVDCLAPHHSLEYCEVSDYHISEINDKKIVVNVTGDLHVVLQYGSSSDRREGDGLDL HHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCC NENFPFETKIRYEISEDFPSDNHEVDDYDVDTSKWYE CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA