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The map label for this gene is 78188540

Identifier: 78188540

GI number: 78188540

Start: 665033

End: 666031

Strand: Reverse

Name: 78188540

Synonym: Cag_0562

Alternate gene names: NA

Gene position: 666031-665033 (Counterclockwise)

Preceding gene: 78188541

Following gene: 78188536

Centisome position: 25.89

GC content: 44.34

Gene sequence:

>999_bases
ATGATAAAGAATACGCCACTTTCCAACGACTTAGCTCTTTTACGCGCTCAAGCTGAAGAGCTGCTGACGAAAGGGCAGCA
ACAGCTCTCCGATCCCTCTATTTCACCCGGTGATATGCAGCGAATTCTGCATGAATTAGCGGTACATCAAATTGAGTTAG
AAATGCAACAAGAACAACTGTTGCAAGCACGCGTTGAGTTAGAAGAGAGCATTGAGTGCTATACCGAACTCTACGATTTT
GCTCCGCTTGGCTATGTAACCTTGAGCCGCAATGGAACCATACAACAAGTTAATTTAACAGCAACAAAATTATTAGGCAT
TGAGCGTTCTCGATTGGTAGGCGATTATTTTGGGCGCTTGATAGTAGCGGAAGATATAAAGGCATTTCAAGCCATGCTTG
AACAAGTTTTTGTGCAGCAAAAGCACACCTCATGCGAAGTAAAGCTCTTTAACACCCGTCAGCAATCCACCTCTCCGCTG
TTGCCCTCGCCAGCCCACAACGAAACATTGCCCCACACCATTCGTATTGATGCCGTGCTAAGCACTGATGGTGAAGAGTG
CAGCGTTGTGGTGTCGGACATTAGTATGCAAAAACAAATTGAGCGCGAAAATCAAGCTTTGAAAGAGCAACTCAATCAAA
CATTACTCCCTGAGCTTACACCAAATGAAATCACTAACAGTGAGATTGATGACAACAATGCCGCCGATTTTAATCATGCC
TTACTCGACAAAGTAATTCATTCACGCATTCGCTTTGCCATACTCTCCTATCTCAGTACGGCAGGCAAAGCCTCATTTGT
TACCATAAAACGGCAGATAAATACCACCGATGGCAACTTAAGCGTTCATTTACGAATGCTTGAATCCGCCGCTTATGTGA
GTTCCGACCGCGAAATAAATGAGAACAAAATGCAAACAACACTATACACCATTACTGAAGCGGGTAACCATGCCTTGCAA
GCCTATAAACGGCAACTCCGTGCATTTCTTGGGCTGTAA

Upstream 100 bases:

>100_bases
TTTGTGAAATTTTCTTATTTCTGGATTCCCGCCTTCGCGGGAATGACAAAATCGAGTTACTCATGAACAATTTAGGTTAG
AACTAAACAATAGGATTATA

Downstream 100 bases:

>100_bases
AAGAGGGTTGTAGAATAGTCAACAATGCAAAAGCCCCACGTTTAACGTGGGGCTTTTGCATTGCTCATTGCTGTACGATG
TGGTGCATGTGAACTTATTC

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Transcriptional Regulator; Histidine Kinase; ArsR Family Transcriptional Regulator; PAS/PAC Sensor-Containing Diguanylate Cyclase; Regulatory Protein Arsr; PAS Sensor Protein; Transcriptional Regulator ArsR Family Protein; Sensory Domain-Containing/LuxR Family Regulatory Protein; Arsr Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Sensory Transduction Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQIELEMQQEQLLQARVELEESIECYTELYDF
APLGYVTLSRNGTIQQVNLTATKLLGIERSRLVGDYFGRLIVAEDIKAFQAMLEQVFVQQKHTSCEVKLFNTRQQSTSPL
LPSPAHNETLPHTIRIDAVLSTDGEECSVVVSDISMQKQIERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHA
LLDKVIHSRIRFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREINENKMQTTLYTITEAGNHALQ
AYKRQLRAFLGL

Sequences:

>Translated_332_residues
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQIELEMQQEQLLQARVELEESIECYTELYDF
APLGYVTLSRNGTIQQVNLTATKLLGIERSRLVGDYFGRLIVAEDIKAFQAMLEQVFVQQKHTSCEVKLFNTRQQSTSPL
LPSPAHNETLPHTIRIDAVLSTDGEECSVVVSDISMQKQIERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHA
LLDKVIHSRIRFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREINENKMQTTLYTITEAGNHALQ
AYKRQLRAFLGL
>Mature_332_residues
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQIELEMQQEQLLQARVELEESIECYTELYDF
APLGYVTLSRNGTIQQVNLTATKLLGIERSRLVGDYFGRLIVAEDIKAFQAMLEQVFVQQKHTSCEVKLFNTRQQSTSPL
LPSPAHNETLPHTIRIDAVLSTDGEECSVVVSDISMQKQIERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHA
LLDKVIHSRIRFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREINENKMQTTLYTITEAGNHALQ
AYKRQLRAFLGL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37390; Mature: 37390

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQIELEMQQEQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQARVELEESIECYTELYDFAPLGYVTLSRNGTIQQVNLTATKLLGIERSRLVGDYFGRL
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHH
IVAEDIKAFQAMLEQVFVQQKHTSCEVKLFNTRQQSTSPLLPSPAHNETLPHTIRIDAVL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEE
STDGEECSVVVSDISMQKQIERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHA
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
LLDKVIHSRIRFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREIN
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCC
ENKMQTTLYTITEAGNHALQAYKRQLRAFLGL
HHHHHHHHEEEHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQIELEMQQEQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQARVELEESIECYTELYDFAPLGYVTLSRNGTIQQVNLTATKLLGIERSRLVGDYFGRL
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHH
IVAEDIKAFQAMLEQVFVQQKHTSCEVKLFNTRQQSTSPLLPSPAHNETLPHTIRIDAVL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEE
STDGEECSVVVSDISMQKQIERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHA
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
LLDKVIHSRIRFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREIN
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCC
ENKMQTTLYTITEAGNHALQAYKRQLRAFLGL
HHHHHHHHEEEHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA