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The map label for this gene is 78188085

Identifier: 78188085

GI number: 78188085

Start: 116979

End: 117326

Strand: Reverse

Name: 78188085

Synonym: Cag_0102

Alternate gene names: NA

Gene position: 117326-116979 (Counterclockwise)

Preceding gene: 78188086

Following gene: 78188084

Centisome position: 4.56

GC content: 47.7

Gene sequence:

>348_bases
ATGACCGATAAAGCATTCAAATATTGGCACTCCATGAGTGATCAGGCGCTTGCCGCACATATCGGCAACTTTGTAAAGCA
TCACCGGTTGGAGCAAAACAAAACCCAGAATGCCCTGTCGCATGAAGCGGGCATCAGTCGTTCCACCCTCAGTTTATTGG
AGCGGGGCGAAACCGTAACCTTAGCCACCCTAATACAGGTGCTTCGGGTACTGAATCAACTACAGGTAATGGATGCTTTT
GAAGTGCAGCAGCGCCTCAGTCCGCTGGTATTAGCCAAAGCTGAGCAGGAAAAACGTAAAAGAGCAAGGAGCACTAAAAC
ACAAGATTCTGAAAAATCAGACTGGTAA

Upstream 100 bases:

>100_bases
CGTTCATAAAGACTGATTATTCTTGATTCTATATTGAACTTTTCAAACTATTATTATGTTTGCATGAGATTTAATTCATA
AAACACTAATAATAGGAATT

Downstream 100 bases:

>100_bases
GCAATGAAAACGGCATTTGTAAAAATATGGGGCGAATTAGTGGGAGCGGTAGCTTGGGATGATGCTACCGGCTATGCCAC
GTTTGAATATGATGCCAAAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTLSLLERGETVTLATLIQVLRVLNQLQVMDAF
EVQQRLSPLVLAKAEQEKRKRARSTKTQDSEKSDW

Sequences:

>Translated_115_residues
MTDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTLSLLERGETVTLATLIQVLRVLNQLQVMDAF
EVQQRLSPLVLAKAEQEKRKRARSTKTQDSEKSDW
>Mature_114_residues
TDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTLSLLERGETVTLATLIQVLRVLNQLQVMDAFE
VQQRLSPLVLAKAEQEKRKRARSTKTQDSEKSDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13171; Mature: 13040

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTLSLLERGETVT
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH
LATLIQVLRVLNQLQVMDAFEVQQRLSPLVLAKAEQEKRKRARSTKTQDSEKSDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTLSLLERGETVT
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH
LATLIQVLRVLNQLQVMDAFEVQQRLSPLVLAKAEQEKRKRARSTKTQDSEKSDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA