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The map label for this gene is queC [H]

Identifier: 78067939

GI number: 78067939

Start: 3636941

End: 3637675

Strand: Reverse

Name: queC [H]

Synonym: Bcep18194_A6470

Alternate gene names: 78067939

Gene position: 3637675-3636941 (Counterclockwise)

Preceding gene: 78067940

Following gene: 78067938

Centisome position: 98.47

GC content: 66.94

Gene sequence:

>735_bases
GTGATTCGGACAGACGCTAAAGACGGCGCGCTCGTGTTGTTTTCCGGCGGGCAGGACTCGGCCACGTGCGTGGCATGGGC
CCTCGAACGCTACCAGACGGTCGAGACGCTCGGCTTCGATTACGGCCAGCGCCATCGCGTCGAGCTCGAATGTCGCGAAG
GCGTGCGCGAAGCGCTGAAGCGTGACTTTCCCGCGTGGTCGGACCGACTCGGCGACGATCACATGATCGACCTGTCGGTG
CTCGGCGCGATCAGCGATACCGCGATGACGCGCACGATCGAGATCGAGACGGCGGCGAACGGCCTGCCGAACACGTTCGT
GCCGGGCCGCAACCTGATGTTCATGACGATCGCCGCGGCGATCGCCTATCGCCGCGGGCTGCGGGTGCTGGTCGGCGGGA
TGTGCGAGACCGATTTCTCGGGCTACCCCGATTGCCGCGACGACACGATGAAGGCGCTGCAGGTCGCGCTGAACCTCGGG
ATGGATACGCGCGTCGTGCTCGAGACGCCGCTGATGTGGCTCGACAAGGCACAGACGTGGCAGCTCGCCGAGCAGCTCGG
CGGCGAAGCGCTCGTCGAACTGATCCGCGTCGAGACGCACACGTGCTACGTGGGCGAGCGCGCGGAACTGCACGACTGGG
GTTTCGGCTGCGGCGAATGCCCGGCCTGCAAGCTGCGCAAGCGCGGCTACGAGGCCTACCTGAAGGGCGAGCGGGTGACC
GAAGCGCCGCTGTGA

Upstream 100 bases:

>100_bases
CTGGTCGAGCCGGCCCAGGCCGGCACGCGTCGGGCCGCCCGGCGGCAGCCGGCCCCGGGGCGCAGCGCGACGCGAGCCTA
CACATTCACGGAGTATCACG

Downstream 100 bases:

>100_bases
TGCAGCAGCAACGGCGGCGCCTGGTGATTAACGGATTCTGATCGACAACGAGCGGCGCGAGCCGGACGAAGCACGATGAC
TTACGCGGTCAAGGAAATTT

Product: ExsB family protein

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine synthase; PreQ(0) synthase; Queuosine biosynthesis protein queC [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAWSDRLGDDHMIDLSV
LGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRVVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLKGERVT
EAPL

Sequences:

>Translated_244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAWSDRLGDDHMIDLSV
LGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRVVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLKGERVT
EAPL
>Mature_244_residues
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAWSDRLGDDHMIDLSV
LGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDDTMKALQVALNLG
MDTRVVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLKGERVT
EAPL

Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]

COG id: COG0603

COG function: function code R; Predicted PP-loop superfamily ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the queC family [H]

Homologues:

Organism=Escherichia coli, GI1786648, Length=229, Percent_Identity=45.4148471615721, Blast_Score=199, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018317
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06508 ExsB [H]

EC number: NA

Molecular weight: Translated: 27176; Mature: 27176

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
RDFPAWSDRLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAA
HCCCCHHHHCCCCCEEHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
IAYRRGLRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTW
HHHHHCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCHHH
QLAEQLGGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLKGERVT
HHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCC
EAPL
CCCC
>Mature Secondary Structure
MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
RDFPAWSDRLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAA
HCCCCHHHHCCCCCEEHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
IAYRRGLRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTW
HHHHHCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCHHH
QLAEQLGGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLKGERVT
HHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCC
EAPL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA