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The map label for this gene is fliF

Identifier: 78067882

GI number: 78067882

Start: 3580475

End: 3582238

Strand: Direct

Name: fliF

Synonym: Bcep18194_A6413

Alternate gene names: 78067882

Gene position: 3580475-3582238 (Clockwise)

Preceding gene: 78067875

Following gene: 78067883

Centisome position: 96.92

GC content: 68.25

Gene sequence:

>1764_bases
ATGGATTCGCAGGCCAACTCGCTGATCAACCCAGACGCCCGCGCGGGCCTCGCCAGCCCGGCGCCCGGCGCCGCCGCGGC
CGCCGCGTTGCCGGGCGCGGGTGGCGCAGGCGCGGACTTCGGGCTTGGCGGCTTCGCGGAACGCATCCCCGGCATCTCGC
GGATGAAGGGCAACCCGAAGCTGCCGTTCCTGATCGCCGTCGCATTCGCGGTCGCCGTCATCACCGCGCTCGTGCTGTGG
AGCCGTGCGCCCGACTACCGCGTGCTGTACAGCAACCTGTCGGATCGCGACGGCGGCGCAATCATTGCCGCGCTCCAGCA
GGCAAACGTTCCCTACAAGTTCGCCGATGCCGGCGGCGCGATCCTCGTGCCGTCGAACCAGGTGCATGAAACGCGCCTGA
AGCTCGCCGCGATGGGGCTGCCGAAAGGCGGCTCGGTCGGCTTCGAGCTGATGGACAACCAGAAATTCGGCATCAGCCAG
TTCGCCGAGCAGATCAACTACCAGCGCGCGCTCGAAGGCGAGCTGCAGCGCACCATCGAATCGATCAACGCCGTGCGCGG
CGCGCGCGTGCATCTCGCGATCCCGAAACCGTCGGTGTTCGTGCGCGACAAGGAAGCGCCGAGCGCGTCGGTGTTCGTCG
ACCTCTACCCGGGCCGCGTGCTCGACGAGGGCCAGGTTCAGGCAATCACGCGGATGGTGTCGTCCGGCGTGCCCGACATG
CCCGCGAAGAACGTGACGATCGTCGACCAGGACGGCAACCTGCTGACCCAGACCGCGTCGGCATCCGGCCTCGACGCGAG
CCAGCTCAAGTATGTACAGCAGGTCGAGCACAACACGCAGAAGCGCATCGACGCGATCCTCGCGCCGATCTTCGGCACGG
GCAACGCGCGCTCGCAGGTCAGCGCGGACCTCGATTTCTCGAAGATCGAGCAGACGTCGGAAAGCTACGGCCCGAACGGC
AATCCGCAGCAATCCGCGATCCGCAGCCAGCAGACCAGCAGCGCGACCGAACTCGCGCAGGGCGGCGCGTCGGGCGTGCC
GGGCGCGCTGTCGAACACGCCGCCGCAACCGGCTTCCGCGCCGATCGTCGCCGGCAACGGCCAGAACGCGCCGCAGACAA
CCCCGGTGAGCGACCGCAAGGACCAGACGACCAACTACGAAGTCGACAAGACGATCCGCCATCTCGAGCAGCCGATGGGC
AGCGTGAAGCGGCTGTCGGTCGCGGTCGTCGTCAACTACCAGCCGGTCGCCGACGCGAAGGGCCACGTGACGATGCAGCC
GCTGCCGCCCGCGAAGCTCGCGCAGGTCGAACAGCTCGTGAAGGATGCGATGGGCTACGACGAGAAGCGCGGCGACTCGG
TGAACGTCGTGAACAGCGCGTTCTCGACCGTGAGCGACCCGTACGCCGACCTGCCGTGGTGGCGCCAGCCGGACATGATC
GCGATGGCGAAGGAAGCGGCGAAGTGGCTCGGCATCGCTGCGGCCGCCGCGGCGCTCTACTTCATGTTCGTGCGCCCGGC
GATGCGCCGTGCGTTCCCGCCGCCCGAGCCGGTCGCACCGGCGCTCGCGGCACCGGAAGATTCCGTCGCGCTCGACGGCC
TGCCGGGACCGGAGAAGTCCGAGGAGCCCGACGCGCTGCTGCTCGGGTTCGAAAGCGAAAAGAACCGTTACGAACGCAAC
CTCGACTACGCGCGCACGATCGCCCGCCAGGATCCGAAGATCGTCGCCACCGTCGTGAAGAACTGGGTGTCCGATGAACG
CTGA

Upstream 100 bases:

>100_bases
TCGATCGGAGTACGGCCCGGGTCACGATAATCGCATCGTGTCATTGTCCGCCCGCTCGTCCGAGCGAGCTCAGTCGTCCC
GCTCCGGAGAAACTCGACGC

Downstream 100 bases:

>100_bases
AGGCTTGACCAAGAGCGCGCTCCTGCTGATGTCGATCGGCGAGGAAGAGGCCGCGCAGGTATTCAAGTTCCTCGCGCCGC
GCGAGGTCCAGAAGATCGGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MDSQANSLINPDARAGLASPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFLIAVAFAVAVITALVLW
SRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSNQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQ
FAEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDM
PAKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGTGNARSQVSADLDFSKIEQTSESYGPNG
NPQQSAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNAPQTTPVSDRKDQTTNYEVDKTIRHLEQPMG
SVKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDEKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMI
AMAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPVAPALAAPEDSVALDGLPGPEKSEEPDALLLGFESEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER

Sequences:

>Translated_587_residues
MDSQANSLINPDARAGLASPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFLIAVAFAVAVITALVLW
SRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSNQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQ
FAEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDM
PAKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGTGNARSQVSADLDFSKIEQTSESYGPNG
NPQQSAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNAPQTTPVSDRKDQTTNYEVDKTIRHLEQPMG
SVKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDEKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMI
AMAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPVAPALAAPEDSVALDGLPGPEKSEEPDALLLGFESEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER
>Mature_587_residues
MDSQANSLINPDARAGLASPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPKLPFLIAVAFAVAVITALVLW
SRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGAILVPSNQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQ
FAEQINYQRALEGELQRTIESINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDM
PAKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGTGNARSQVSADLDFSKIEQTSESYGPNG
NPQQSAIRSQQTSSATELAQGGASGVPGALSNTPPQPASAPIVAGNGQNAPQTTPVSDRKDQTTNYEVDKTIRHLEQPMG
SVKRLSVAVVVNYQPVADAKGHVTMQPLPPAKLAQVEQLVKDAMGYDEKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMI
AMAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPVAPALAAPEDSVALDGLPGPEKSEEPDALLLGFESEKNRYERN
LDYARTIARQDPKIVATVVKNWVSDER

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=550, Percent_Identity=48.1818181818182, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 62320; Mature: 62320

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQANSLINPDARAGLASPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPK
CCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCC
LPFLIAVAFAVAVITALVLWSRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHCCCCEEEECCCCE
ILVPSNQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQFAEQINYQRALEGELQRTIE
EEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDM
HHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
PAKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGTGNARSQV
CCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SADLDFSKIEQTSESYGPNGNPQQSAIRSQQTSSATELAQGGASGVPGALSNTPPQPASA
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PIVAGNGQNAPQTTPVSDRKDQTTNYEVDKTIRHLEQPMGSVKRLSVAVVVNYQPVADAK
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCC
GHVTMQPLPPAKLAQVEQLVKDAMGYDEKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMI
CCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
AMAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPVAPALAAPEDSVALDGLPGPEKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EEPDALLLGFESEKNRYERNLDYARTIARQDPKIVATVVKNWVSDER
CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSQANSLINPDARAGLASPAPGAAAAAALPGAGGAGADFGLGGFAERIPGISRMKGNPK
CCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCC
LPFLIAVAFAVAVITALVLWSRAPDYRVLYSNLSDRDGGAIIAALQQANVPYKFADAGGA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHCCCCEEEECCCCE
ILVPSNQVHETRLKLAAMGLPKGGSVGFELMDNQKFGISQFAEQINYQRALEGELQRTIE
EEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SINAVRGARVHLAIPKPSVFVRDKEAPSASVFVDLYPGRVLDEGQVQAITRMVSSGVPDM
HHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
PAKNVTIVDQDGNLLTQTASASGLDASQLKYVQQVEHNTQKRIDAILAPIFGTGNARSQV
CCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SADLDFSKIEQTSESYGPNGNPQQSAIRSQQTSSATELAQGGASGVPGALSNTPPQPASA
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PIVAGNGQNAPQTTPVSDRKDQTTNYEVDKTIRHLEQPMGSVKRLSVAVVVNYQPVADAK
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCC
GHVTMQPLPPAKLAQVEQLVKDAMGYDEKRGDSVNVVNSAFSTVSDPYADLPWWRQPDMI
CCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
AMAKEAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEPVAPALAAPEDSVALDGLPGPEKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EEPDALLLGFESEKNRYERNLDYARTIARQDPKIVATVVKNWVSDER
CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]