| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067878
Identifier: 78067878
GI number: 78067878
Start: 3577436
End: 3578791
Strand: Reverse
Name: 78067878
Synonym: Bcep18194_A6409
Alternate gene names: NA
Gene position: 3578791-3577436 (Counterclockwise)
Preceding gene: 78067879
Following gene: 78067877
Centisome position: 96.88
GC content: 75.29
Gene sequence:
>1356_bases ATGACCGGTATCGACTCCGTTGCGGCCGCGCTGCTGGCGAGCCGCCTCGACAGCTTGCTGACCGGCACCGTGTCGGCGCC CGCCGGCGGCGGCGCGACCTCGCAGGTCGGCACGCCGGGCACCGGCGCGTCGTCCACGCCTTCGGCCGGCAGCCCGCCTG CTGCGCCGCCCGCTTCCACCCAGACTGCGCTATCCGATGTCGGGCGCGTGCTCGACGCGATTTCGCGCGTGGGCGGCGAC TCGACGCCGGCCATTGCCGGGCGCGCGCCGCTGCTGGCCGACCCCACCGTGCTGCTGACCGACACGGCTGCGCCGGCCGC TTCCAATCTTGCTGCGTCTTCCACGCCGGCTTCCGCTGCTGCGTCGTCGGCTGCTGCGGCGCGCGAAGCGGCTGCGACTT TGCCGGTCGCGGCGCTGCGCGCAGCGCTCGCCCAGGCGGTGAGCGAAAGCGGCCTTTTCTACGAATCCCATCTCGCGCAG TGGCTGGCCGGCCAGCGTCCGCTCGCGGCGCTGATGCGCGAGCCGCAGGCGCGCCTCGCGGCCGCGCTCGCGCCGGCCGA TCCGGACGCCGCACAGCACGGCTCGACCGACCTGCTCGACGAGCTGCTCGCGCAGCGCCCGTCTTTGCCGGCGGCCGCGC GGGCAACGGCGCAGCCGGGCACGCCGGCCCAGGGCGGCGCGTCGGCTCGCGATCCTGCGCAGGCGTTGCCGGCAGTCACG CGGCAGGGCGCGTCGCTGCCGCCCGATACGGCCGATCCGCTCGGCGAGCGTGCCGATACACGCTGGACGCCCGCGCGGGC CGAGCTGGCTACCGCGTCGTCCGATTCGCAGGCGCAGACGCTGGCGACCGTGCATCCGGCCGCCGTGCCGCTCGTCAGGC AGCAGCTCGACGCGCTCGCGACCGACCAGTTTCGCTGGGCGGGCGAGGCATGGCCCGGCGCGCGGCTCGACTGGACGATC GAACCCGACGATCAGGGCAACCGTGCGCCGCGCAGCGACGTCGACACGGGCGACGGCATTGCCTGGCGCACGCGCCTCAC GCTGACGTTGCCGTCGCTCGGCACGGTCGACGCGGAGCTGGTGCTGAACGGCACGCAGCTCGTCGCGCGGCTGCGTGCGA ACCAGGCGGGTGCTGACCGTCTCACGCGGCACGAGGCGGCGTTGCGGCAGCGGCTCGAAGTGTCGGGGCTCAAGGTGGGC GGGCTGTCGATCCGCGCGGTCGATGACGGCCCGGACGGCTTCGACCTGTTTGCGGCCCAGGCGGCCGCCGCCGCGTATGC GCGCGGTTCGGCGTCGGCGGCGGCCAGCGGCCCGGCGACACGTGCGCCCGATACCGACGACGAGGCGCTGTCATGA
Upstream 100 bases:
>100_bases CGCACGAATCCGCTGTGGCAGGCGCGCAGTTCCCGCGGGCGGCACCAATGTGCCGTTCCCGGATTCGCAACGATGTGGCT GAGATAAGCAGGCTCCGATC
Downstream 100 bases:
>100_bases GCATGACGTCCCGCAAGCGCGCGGCCGCGCTCGTCTACGATCCGAAGGGCGGCGATGCGGCGCCGCGCGTGGTCGCGAAG GGCTACGGCGCGCTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTGIDSVAAALLASRLDSLLTGTVSAPAGGGATSQVGTPGTGASSTPSAGSPPAAPPASTQTALSDVGRVLDAISRVGGD STPAIAGRAPLLADPTVLLTDTAAPAASNLAASSTPASAAASSAAAAREAAATLPVAALRAALAQAVSESGLFYESHLAQ WLAGQRPLAALMREPQARLAAALAPADPDAAQHGSTDLLDELLAQRPSLPAAARATAQPGTPAQGGASARDPAQALPAVT RQGASLPPDTADPLGERADTRWTPARAELATASSDSQAQTLATVHPAAVPLVRQQLDALATDQFRWAGEAWPGARLDWTI EPDDQGNRAPRSDVDTGDGIAWRTRLTLTLPSLGTVDAELVLNGTQLVARLRANQAGADRLTRHEAALRQRLEVSGLKVG GLSIRAVDDGPDGFDLFAAQAAAAAYARGSASAAASGPATRAPDTDDEALS
Sequences:
>Translated_451_residues MTGIDSVAAALLASRLDSLLTGTVSAPAGGGATSQVGTPGTGASSTPSAGSPPAAPPASTQTALSDVGRVLDAISRVGGD STPAIAGRAPLLADPTVLLTDTAAPAASNLAASSTPASAAASSAAAAREAAATLPVAALRAALAQAVSESGLFYESHLAQ WLAGQRPLAALMREPQARLAAALAPADPDAAQHGSTDLLDELLAQRPSLPAAARATAQPGTPAQGGASARDPAQALPAVT RQGASLPPDTADPLGERADTRWTPARAELATASSDSQAQTLATVHPAAVPLVRQQLDALATDQFRWAGEAWPGARLDWTI EPDDQGNRAPRSDVDTGDGIAWRTRLTLTLPSLGTVDAELVLNGTQLVARLRANQAGADRLTRHEAALRQRLEVSGLKVG GLSIRAVDDGPDGFDLFAAQAAAAAYARGSASAAASGPATRAPDTDDEALS >Mature_450_residues TGIDSVAAALLASRLDSLLTGTVSAPAGGGATSQVGTPGTGASSTPSAGSPPAAPPASTQTALSDVGRVLDAISRVGGDS TPAIAGRAPLLADPTVLLTDTAAPAASNLAASSTPASAAASSAAAAREAAATLPVAALRAALAQAVSESGLFYESHLAQW LAGQRPLAALMREPQARLAAALAPADPDAAQHGSTDLLDELLAQRPSLPAAARATAQPGTPAQGGASARDPAQALPAVTR QGASLPPDTADPLGERADTRWTPARAELATASSDSQAQTLATVHPAAVPLVRQQLDALATDQFRWAGEAWPGARLDWTIE PDDQGNRAPRSDVDTGDGIAWRTRLTLTLPSLGTVDAELVLNGTQLVARLRANQAGADRLTRHEAALRQRLEVSGLKVGG LSIRAVDDGPDGFDLFAAQAAAAAYARGSASAAASGPATRAPDTDDEALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45118; Mature: 44987
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDSVAAALLASRLDSLLTGTVSAPAGGGATSQVGTPGTGASSTPSAGSPPAAPPAST CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QTALSDVGRVLDAISRVGGDSTPAIAGRAPLLADPTVLLTDTAAPAASNLAASSTPASAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHH ASSAAAAREAAATLPVAALRAALAQAVSESGLFYESHLAQWLAGQRPLAALMREPQARLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCHHHHHH AALAPADPDAAQHGSTDLLDELLAQRPSLPAAARATAQPGTPAQGGASARDPAQALPAVT HHHCCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RQGASLPPDTADPLGERADTRWTPARAELATASSDSQAQTLATVHPAAVPLVRQQLDALA HCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH TDQFRWAGEAWPGARLDWTIEPDDQGNRAPRSDVDTGDGIAWRTRLTLTLPSLGTVDAEL HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHH VLNGTQLVARLRANQAGADRLTRHEAALRQRLEVSGLKVGGLSIRAVDDGPDGFDLFAAQ EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCEEEEEECCCCCCHHHHHHH AAAAAYARGSASAAASGPATRAPDTDDEALS HHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TGIDSVAAALLASRLDSLLTGTVSAPAGGGATSQVGTPGTGASSTPSAGSPPAAPPAST CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QTALSDVGRVLDAISRVGGDSTPAIAGRAPLLADPTVLLTDTAAPAASNLAASSTPASAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHH ASSAAAAREAAATLPVAALRAALAQAVSESGLFYESHLAQWLAGQRPLAALMREPQARLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCHHHHHH AALAPADPDAAQHGSTDLLDELLAQRPSLPAAARATAQPGTPAQGGASARDPAQALPAVT HHHCCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RQGASLPPDTADPLGERADTRWTPARAELATASSDSQAQTLATVHPAAVPLVRQQLDALA HCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH TDQFRWAGEAWPGARLDWTIEPDDQGNRAPRSDVDTGDGIAWRTRLTLTLPSLGTVDAEL HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHH VLNGTQLVARLRANQAGADRLTRHEAALRQRLEVSGLKVGGLSIRAVDDGPDGFDLFAAQ EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCEEEEEECCCCCCHHHHHHH AAAAAYARGSASAAASGPATRAPDTDDEALS HHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA