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The map label for this gene is 78067823

Identifier: 78067823

GI number: 78067823

Start: 3519835

End: 3520956

Strand: Reverse

Name: 78067823

Synonym: Bcep18194_A6354

Alternate gene names: NA

Gene position: 3520956-3519835 (Counterclockwise)

Preceding gene: 78067824

Following gene: 78067822

Centisome position: 95.31

GC content: 66.04

Gene sequence:

>1122_bases
ATGAAGCAGACCACCCGACTCGCAGCCATCGCAGGGGGCGCCGCGCTCGCATTCGCCAGCCAGTACGCGGCCGCACAAAG
CTCGGTCACGCTCTGGGGCGTCGCCGACGCCAGCATCCGCTACCTGACCAACGCCAACGCCAAGAACGACGGCCTGCTGT
CGATGACCAACGGCGCGATCACGAACAGCCGCTTCGGCATCTACGGCACGGAAGATCTCGGCGGCGGCCTGAAGGCCGTG
TTCAACCTCGAGAGCGGCGTGAACCTGCAGAACGGCGCATTCGCCGACAGCGGCCGCCTGTTCAACCGCGCAGCGTACGT
CGGCCTGCAGAGCCCGTACGGCACGGTGACCCTCGGCCGCCAGAAGACGCCGCTGTTCGACCTGCTGTCGGACACCTACG
ATCCGCTGACCGTCGGTAACTACCTCGAAAACGCGTGGCTGCCGGTCGCACTCGGCGGCGGCCTGTATGCGGACAACCAG
ATCAAGTACACGGGCAAGTTCGAAGGCCTGACCGCGAAGGCGATGTACTCGACCGGCACCAACTACGAATCGACCGGCGC
CGGCGGCTTCTCGGGCCAGATCCCGGGCTCGCTCGGCAAGGGCAATGCGTGGGGCGTGTCGCTGTCGTACGTGATGGGCC
CGCTCAGCATCGCAGCCGGCGCGCAGCAGAACAGCGACAACTCGGCGCGCAAGCAGACGATCTACCACGCGAACGTCGTG
TATGCGTTCAGCAAGGCGAAGATCTATGCGGGCTACCTGCGCTCGAAGGACGACACGGGCTTCGTCGACAGCCTGCTCGC
GCAGCAGTCGATTCCGGTCGCGAAGGGCACCGGCCGGATCGACGACGGTCCGTTCGCGGGCGTGAGCTGGCAGGTCAGCG
CGCCGCTGACGCTGACGGGCGCGTTCTACTACGACCATATGCGCAATGCGATGACCACCAACGGCACGCTCGCGAGCGGC
AACCGCTACGCGATCGTCGGCATCGCCGAGTACGCACTCAGCAAGCGCACGGAAGTCTACGGCACCGTCGATTTCAACAA
GACGAACGGCGCGGCGAACGTCGAGCTGCCGGGCCGCAGCAACCAGACCGGCATCGCGATCGGCCTGCGCAATATCTTCT
GA

Upstream 100 bases:

>100_bases
TGATTCAGCCCACATCGCGCGCGCCAAGAACGCGAGCGATCGCCACCCGGTTGCGCACGCGGCCGGCCATGAATGGAGAC
ACCTACAAAAAGGAAAGCTC

Downstream 100 bases:

>100_bases
CGAACGTCGGAACGCATGGGCCGGCAGTCGTCCGGCATGCATCGAAGGGGCGCCGCAAGGCGCCTCTTTTTTTTCGTCGC
GCGACCTTCATACGCGCATT

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKQTTRLAAIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF

Sequences:

>Translated_373_residues
MKQTTRLAAIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF
>Mature_373_residues
MKQTTRLAAIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39202; Mature: 39202

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTTRLAAIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAI
CCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCE
TNSRFGIYGTEDLGGGLKAVFNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGR
ECCCCEEEECHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
QKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQIKYTGKFEGLTAKAMYSTGT
CCCCHHHHHHCCCCCCCHHHHHHCCEEEEEECCCEEECCEEEEEEEECCEEEEEEEECCC
NYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCHHHEEEEEEEEE
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTG
EEEECCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
AFYYDHMRNAMTTNGTLASGNRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRS
HHHHHHHHHCCCCCCEEECCCEEEEEEEHHHHHCCCCEEEEEEEEECCCCEEEEEECCCC
NQTGIAIGLRNIF
CCCEEEEEEECCC
>Mature Secondary Structure
MKQTTRLAAIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAI
CCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCE
TNSRFGIYGTEDLGGGLKAVFNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGR
ECCCCEEEECHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
QKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQIKYTGKFEGLTAKAMYSTGT
CCCCHHHHHHCCCCCCCHHHHHHCCEEEEEECCCEEECCEEEEEEEECCEEEEEEEECCC
NYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCHHHEEEEEEEEE
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTG
EEEECCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
AFYYDHMRNAMTTNGTLASGNRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRS
HHHHHHHHHCCCCCCEEECCCEEEEEEEHHHHHCCCCEEEEEEEEECCCCEEEEEECCCC
NQTGIAIGLRNIF
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]