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The map label for this gene is puuD [H]

Identifier: 78067811

GI number: 78067811

Start: 3505121

End: 3505909

Strand: Direct

Name: puuD [H]

Synonym: Bcep18194_A6342

Alternate gene names: 78067811

Gene position: 3505121-3505909 (Clockwise)

Preceding gene: 78067810

Following gene: 78067812

Centisome position: 94.88

GC content: 72.12

Gene sequence:

>789_bases
ATGGAAAGAAGGAAACCCCTCGTCGGCATCACCGCCGACCACACGCAAATCGGCGCGCACGCGTCGCATACGGTCGGCGA
CAAATACGTCGCCGCGATCGTCGACGGCGCGCAAGCGTTCGCGATGGTGCTGCCCGCGCTCGGCGAGCGCCAGTCGGTCG
ACGACGTACTCGACACGGTCGACGGCCTGCTGTTTACCGGCAGCTACTCGAACGTCGAGCCGCACCTGTACGGCGGCGAA
CCGAGCGCACCGGGCACGAAGCACGACCCGGCCCGCGACGCGACCACGCTGCCGCTGCTGCGCGCGGCGATCGCCGCGGG
CGTGCCCGTGCTGGCCGTCTGCCGCGGCTTCCAGGAGCTGAACGTCGTCTGCGGCGGCACGCTGCACCAGCGCGTGCATG
AAGTGCCGGGCTTCGCCGACCACCGCGAGGACGACGACGCGCCGATGGATACGCAGTACGGCCCCGCGCACGTCGTGCGC
CTCACGCCCGGCGGCAAGCTGCACGCGCTCGCCGGCGGCCGCGACGAAGTGCACGTGAACTCGCTGCACAAGCAGGGCAT
CGCGCAGCTCGGCTCCGGCCTCGCCGTCGAGGCCGTCGCGCCAGACGGGCTGATCGAAGCCGTGAGCGTCGTCGATGCAC
CGGCTTTCGCCCTCGCCGTCCAGTGGCATCCGGAATGGCGCCATGCGCAGGACCCGCTGTCGAGCGCGATCTTCCGCGCC
TTCGGCGATGCCTGCCGCGCCCGCCGCGCCACCCGCACGCGTGCCACGGCCGCTGCCGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
GCCCTGCGTCTCACGCAAGGCTGCGGGGTTGTTGCACGCCGGCGTTTCGCCACATCCGGCAAGACGGACGCAACAACCCT
CCGGATAACTGATTGACGTC

Downstream 100 bases:

>100_bases
GCGCCGACCCAACCAACGAGAACAGACATGCATGACATCGAAGATTTTCTGAAGCAGCACCGGATCACTGAAGTCGAAGC
GATCATTCCCGACATGGCCG

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MERRKPLVGITADHTQIGAHASHTVGDKYVAAIVDGAQAFAMVLPALGERQSVDDVLDTVDGLLFTGSYSNVEPHLYGGE
PSAPGTKHDPARDATTLPLLRAAIAAGVPVLAVCRGFQELNVVCGGTLHQRVHEVPGFADHREDDDAPMDTQYGPAHVVR
LTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHPEWRHAQDPLSSAIFRA
FGDACRARRATRTRATAAAALA

Sequences:

>Translated_262_residues
MERRKPLVGITADHTQIGAHASHTVGDKYVAAIVDGAQAFAMVLPALGERQSVDDVLDTVDGLLFTGSYSNVEPHLYGGE
PSAPGTKHDPARDATTLPLLRAAIAAGVPVLAVCRGFQELNVVCGGTLHQRVHEVPGFADHREDDDAPMDTQYGPAHVVR
LTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHPEWRHAQDPLSSAIFRA
FGDACRARRATRTRATAAAALA
>Mature_262_residues
MERRKPLVGITADHTQIGAHASHTVGDKYVAAIVDGAQAFAMVLPALGERQSVDDVLDTVDGLLFTGSYSNVEPHLYGGE
PSAPGTKHDPARDATTLPLLRAAIAAGVPVLAVCRGFQELNVVCGGTLHQRVHEVPGFADHREDDDAPMDTQYGPAHVVR
LTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHPEWRHAQDPLSSAIFRA
FGDACRARRATRTRATAAAALA

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=252, Percent_Identity=41.2698412698413, Blast_Score=198, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 27518; Mature: 27518

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRKPLVGITADHTQIGAHASHTVGDKYVAAIVDGAQAFAMVLPALGERQSVDDVLDTV
CCCCCCEEEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DGLLFTGSYSNVEPHLYGGEPSAPGTKHDPARDATTLPLLRAAIAAGVPVLAVCRGFQEL
HHEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHH
NVVCGGTLHQRVHEVPGFADHREDDDAPMDTQYGPAHVVRLTPGGKLHALAGGRDEVHVN
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
SLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHPEWRHAQDPLSSAIFRA
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHCCHHHHHHHHH
FGDACRARRATRTRATAAAALA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERRKPLVGITADHTQIGAHASHTVGDKYVAAIVDGAQAFAMVLPALGERQSVDDVLDTV
CCCCCCEEEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DGLLFTGSYSNVEPHLYGGEPSAPGTKHDPARDATTLPLLRAAIAAGVPVLAVCRGFQEL
HHEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHH
NVVCGGTLHQRVHEVPGFADHREDDDAPMDTQYGPAHVVRLTPGGKLHALAGGRDEVHVN
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
SLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHPEWRHAQDPLSSAIFRA
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHCCHHHHHHHHH
FGDACRARRATRTRATAAAALA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]