| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is cscK [H]
Identifier: 78067792
GI number: 78067792
Start: 3490015
End: 3490923
Strand: Direct
Name: cscK [H]
Synonym: Bcep18194_A6323
Alternate gene names: 78067792
Gene position: 3490015-3490923 (Clockwise)
Preceding gene: 78067791
Following gene: 78067793
Centisome position: 94.47
GC content: 72.61
Gene sequence:
>909_bases ATGAGTGGCGGCACGTTTCCGGCTTTCGTGTCGGCGGGCGACATCCTGACCGACATGGTGCGTGCGGGCGATGCGCAATG GACCTCGGTGCCGGGTGGCGCCGGCTGGAACGTCGCGCGCGCGGTTGCGCGGCTCGGCGTGCCGAGCGCGCTCGCGGGCT CGATCGGCGAAGACTGCTTCTCCGACGTGCTGTGGCACACGAGCGAAGCGGCCGGGCTCGACCTGCGTTTCCTGCAGCGC GTCGCGCGGCCGCCGCTGCTCGCGATCGTCCACGAGACCCGCCCGCCCGCGTACTTCTTCATCGGCGAAGCGAGCGCCGA CCTCGCGTTCGATCCGGCGCAACTGCCGGCCGGCTGGACCGACCACGTGAAATGGGCGCATTTCGGCTGCATCAGCCTCG TGCGCGAGCCGCTCGCCGGCACGCTGGCCGCGCTCGCGGCCGACCTGCATGCGCGTGGCGTGAAGATCAGCTTCGACCCG AACGTCCGGAACCTGATGACGGCCGCGTTCCAGCCGACGCTCGCGAAGATGGCCGCGCTCGCCGACCTGATCAAGGTGTC CGACGAGGACCTGCGGCACCTGTTCGGCGGCGACGGCCCCGACGCGATCGGCGCGGTGCGCGCGCTGAACCCGCACGCGG CGGTGCTCGTCACGCGCGGCGCGCAGGCGGCGACGCTCTACGCGGACGGCGACGTGCATGAAGCCAGCCCGCCGCGCGTC GAGGTGGCCGACACCGTCGGCGCGGGCGACGCGTCGATCGGCGGCATGCTGTTCAGCCTGATGGCCGCGCCGCAGCGATC GTGGCGCGAGCATCTCGTGTTCGCGCTGGCGGCGGGCGCCGCCGCGTGCCGGCATACGGGCGCGCACGCGCCAACGCTCG ACGAGGTCGTCGCACTGATCGAACGATGA
Upstream 100 bases:
>100_bases ACGAGAAGAGCCCGGCCGGCAAGACCGACTATCACACGATGGGCGCGTGCTACGACGTGCTCGCGACCCTCGCGCGCGCG CAGCGCAGCGAGCCGACGCA
Downstream 100 bases:
>100_bases TGGAAAAGACGGCGACCGGGCACCGTTCGGTCACCGATAAGCCGCGCTGTACATGCTGCGCCGCAGTGCTACGATGAAGT GTCCTTTTGCGGGAGAGCAC
Product: ribokinase family sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQR VARPPLLAIVHETRPPAYFFIGEASADLAFDPAQLPAGWTDHVKWAHFGCISLVREPLAGTLAALAADLHARGVKISFDP NVRNLMTAAFQPTLAKMAALADLIKVSDEDLRHLFGGDGPDAIGAVRALNPHAAVLVTRGAQAATLYADGDVHEASPPRV EVADTVGAGDASIGGMLFSLMAAPQRSWREHLVFALAAGAAACRHTGAHAPTLDEVVALIER
Sequences:
>Translated_302_residues MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQR VARPPLLAIVHETRPPAYFFIGEASADLAFDPAQLPAGWTDHVKWAHFGCISLVREPLAGTLAALAADLHARGVKISFDP NVRNLMTAAFQPTLAKMAALADLIKVSDEDLRHLFGGDGPDAIGAVRALNPHAAVLVTRGAQAATLYADGDVHEASPPRV EVADTVGAGDASIGGMLFSLMAAPQRSWREHLVFALAAGAAACRHTGAHAPTLDEVVALIER >Mature_301_residues SGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQRV ARPPLLAIVHETRPPAYFFIGEASADLAFDPAQLPAGWTDHVKWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPN VRNLMTAAFQPTLAKMAALADLIKVSDEDLRHLFGGDGPDAIGAVRALNPHAAVLVTRGAQAATLYADGDVHEASPPRVE VADTVGAGDASIGGMLFSLMAAPQRSWREHLVFALAAGAAACRHTGAHAPTLDEVVALIER
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 31504; Mature: 31373
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCF CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH SDVLWHTSEAAGLDLRFLQRVARPPLLAIVHETRPPAYFFIGEASADLAFDPAQLPAGWT HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECHHHCCCCCC DHVKWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPNVRNLMTAAFQPTLAKMAAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH ADLIKVSDEDLRHLFGGDGPDAIGAVRALNPHAAVLVTRGAQAATLYADGDVHEASPPRV HHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCE EVADTVGAGDASIGGMLFSLMAAPQRSWREHLVFALAAGAAACRHTGAHAPTLDEVVALI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ER CC >Mature Secondary Structure SGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCF CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH SDVLWHTSEAAGLDLRFLQRVARPPLLAIVHETRPPAYFFIGEASADLAFDPAQLPAGWT HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECHHHCCCCCC DHVKWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPNVRNLMTAAFQPTLAKMAAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH ADLIKVSDEDLRHLFGGDGPDAIGAVRALNPHAAVLVTRGAQAATLYADGDVHEASPPRV HHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCE EVADTVGAGDASIGGMLFSLMAAPQRSWREHLVFALAAGAAACRHTGAHAPTLDEVVALI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ER CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA