Click here to switch to the map view.

The map label for this gene is 78067721

Identifier: 78067721

GI number: 78067721

Start: 3409449

End: 3410675

Strand: Reverse

Name: 78067721

Synonym: Bcep18194_A6252

Alternate gene names: NA

Gene position: 3410675-3409449 (Counterclockwise)

Preceding gene: 78067722

Following gene: 78067720

Centisome position: 92.33

GC content: 71.48

Gene sequence:

>1227_bases
ATGCGGCTCGCGCTCGTTCTGATGGGAGGTGGCGCACGTGCCGCATATCAGGTCGGCGTGCTGAAGGCGCTGGCCGAGAT
CGCGCGCGAGGCCGATCCGCAGCGGCACACGCTGCCGTTCGCGGTCGTGTGCGGCTCGTCGGCCGGCGCGATCAACGCGA
CGTCGATCGCGAGCCATGCAGACGATTTTTCCCACGGCGTGCGGCGCCTGCTCGAATTCTGGGAGCCGCTGCGCGCCGAC
TACGTGTATCGCACCGACTGGCTCGGCATCGCGGCCGCCGGCGCACGCTGGCTCGCGGCGATGACCTTCGGCTGGGCGGC
CCGCCGCTCGCCGCGCGGGTTGCTCGACAACGCGCCGCTCGCGCACCTGCTGCAGCGCGAGCTGAGTTTCCACCGGATCG
AACAGATGCTCGAGGCGCGCCTGCTGCACGCGCTTTCGGTGACGGCGCTCAGCTATTCGAGCGGGCGGCACCTCACGTTC
TACCAGGCGGCCCAGCCGATCCAGGCATGGCGGCGCGCGCAGCGCACCGCGCGGCTCGTCGACCTGTCGGCGTCGCACCT
GCTCGCGTCGTCGGCGATTCCGTTCGTGTTCCCGGCCGTCCCGCTCGTGCTCGACGGGCAGATCGAATACTTCGGTGACG
GGTCGATCCGGCAGATCGCGCCGCTGTCACCGGCGATCCACTTCGGCGCGGACCGGATCGTCGTGGTCGGCGCGGCCGAC
CCGCGGCCCGAGATCCCGGCCGCGAACGGCACCGGGCTGGTACGCGGCTACCCGACGCTCGCGCAGATCGGCCAGCAGGT
GCTCGCGAGCGTGTTCCTCGACTCGATCGGCTCGGACATCGAGCGCATCGAGCACATCAACCGGATGATCGAGCACCTGC
CGCACCAGGTCGAGGTGGACAGCGGCTGGCGGCACGTCGACGTGCTCGCGATCGCGCCGTCCGAGCGCATCGAGCTGATC
GCCGCGAAGCACCTGAAGCAGATGCCGGCGACGATGCGCGGGCTGCTCGGCGCGATCGGCGGCAGCCAGCCGGCCGGCGC
GTCGTTCGCGAGCTACCTGCTGTTCGAGGAGGCGTTCACGCGCGAACTGATCGAGCTCGGCTACCGCGACGGGCGCGCGC
AGCGCGACACGCTGGCCGGCTGGATTGCGCGGGCGGACGGCGGCAGCGCGCCGGCTGCCGGCATGCCGCCGGAAGACGGT
CTCGCGACCGGCGAAATACGGGTCTGA

Upstream 100 bases:

>100_bases
TGCGGCCGGTTCGGCCGCGGCGCGCGCGGCAGCCGCTTCGTCGCCCGAAACCCGTCCGCCGAAGCGCTCGACGTGACGCG
GCGCAGGTAGCAGGTCGATC

Downstream 100 bases:

>100_bases
TGCGTACAGGGCAATGTAAGGTTGCGTTTTCGCGACGGTCGGCCGCGACCGATCGCCGCACCGCGATTGGCGGCGCACGA
CCGGCCAGGCGTCTCGGAAC

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MRLALVLMGGGARAAYQVGVLKALAEIAREADPQRHTLPFAVVCGSSAGAINATSIASHADDFSHGVRRLLEFWEPLRAD
YVYRTDWLGIAAAGARWLAAMTFGWAARRSPRGLLDNAPLAHLLQRELSFHRIEQMLEARLLHALSVTALSYSSGRHLTF
YQAAQPIQAWRRAQRTARLVDLSASHLLASSAIPFVFPAVPLVLDGQIEYFGDGSIRQIAPLSPAIHFGADRIVVVGAAD
PRPEIPAANGTGLVRGYPTLAQIGQQVLASVFLDSIGSDIERIEHINRMIEHLPHQVEVDSGWRHVDVLAIAPSERIELI
AAKHLKQMPATMRGLLGAIGGSQPAGASFASYLLFEEAFTRELIELGYRDGRAQRDTLAGWIARADGGSAPAAGMPPEDG
LATGEIRV

Sequences:

>Translated_408_residues
MRLALVLMGGGARAAYQVGVLKALAEIAREADPQRHTLPFAVVCGSSAGAINATSIASHADDFSHGVRRLLEFWEPLRAD
YVYRTDWLGIAAAGARWLAAMTFGWAARRSPRGLLDNAPLAHLLQRELSFHRIEQMLEARLLHALSVTALSYSSGRHLTF
YQAAQPIQAWRRAQRTARLVDLSASHLLASSAIPFVFPAVPLVLDGQIEYFGDGSIRQIAPLSPAIHFGADRIVVVGAAD
PRPEIPAANGTGLVRGYPTLAQIGQQVLASVFLDSIGSDIERIEHINRMIEHLPHQVEVDSGWRHVDVLAIAPSERIELI
AAKHLKQMPATMRGLLGAIGGSQPAGASFASYLLFEEAFTRELIELGYRDGRAQRDTLAGWIARADGGSAPAAGMPPEDG
LATGEIRV
>Mature_408_residues
MRLALVLMGGGARAAYQVGVLKALAEIAREADPQRHTLPFAVVCGSSAGAINATSIASHADDFSHGVRRLLEFWEPLRAD
YVYRTDWLGIAAAGARWLAAMTFGWAARRSPRGLLDNAPLAHLLQRELSFHRIEQMLEARLLHALSVTALSYSSGRHLTF
YQAAQPIQAWRRAQRTARLVDLSASHLLASSAIPFVFPAVPLVLDGQIEYFGDGSIRQIAPLSPAIHFGADRIVVVGAAD
PRPEIPAANGTGLVRGYPTLAQIGQQVLASVFLDSIGSDIERIEHINRMIEHLPHQVEVDSGWRHVDVLAIAPSERIELI
AAKHLKQMPATMRGLLGAIGGSQPAGASFASYLLFEEAFTRELIELGYRDGRAQRDTLAGWIARADGGSAPAAGMPPEDG
LATGEIRV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44053; Mature: 44053

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALVLMGGGARAAYQVGVLKALAEIAREADPQRHTLPFAVVCGSSAGAINATSIASHA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
DDFSHGVRRLLEFWEPLRADYVYRTDWLGIAAAGARWLAAMTFGWAARRSPRGLLDNAPL
HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AHLLQRELSFHRIEQMLEARLLHALSVTALSYSSGRHLTFYQAAQPIQAWRRAQRTARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHH
DLSASHLLASSAIPFVFPAVPLVLDGQIEYFGDGSIRQIAPLSPAIHFGADRIVVVGAAD
HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCHHHCCCCEEEEEECCC
PRPEIPAANGTGLVRGYPTLAQIGQQVLASVFLDSIGSDIERIEHINRMIEHLPHQVEVD
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEC
SGWRHVDVLAIAPSERIELIAAKHLKQMPATMRGLLGAIGGSQPAGASFASYLLFEEAFT
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RELIELGYRDGRAQRDTLAGWIARADGGSAPAAGMPPEDGLATGEIRV
HHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEC
>Mature Secondary Structure
MRLALVLMGGGARAAYQVGVLKALAEIAREADPQRHTLPFAVVCGSSAGAINATSIASHA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
DDFSHGVRRLLEFWEPLRADYVYRTDWLGIAAAGARWLAAMTFGWAARRSPRGLLDNAPL
HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AHLLQRELSFHRIEQMLEARLLHALSVTALSYSSGRHLTFYQAAQPIQAWRRAQRTARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHH
DLSASHLLASSAIPFVFPAVPLVLDGQIEYFGDGSIRQIAPLSPAIHFGADRIVVVGAAD
HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCHHHCCCCEEEEEECCC
PRPEIPAANGTGLVRGYPTLAQIGQQVLASVFLDSIGSDIERIEHINRMIEHLPHQVEVD
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEC
SGWRHVDVLAIAPSERIELIAAKHLKQMPATMRGLLGAIGGSQPAGASFASYLLFEEAFT
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RELIELGYRDGRAQRDTLAGWIARADGGSAPAAGMPPEDGLATGEIRV
HHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA