| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067672
Identifier: 78067672
GI number: 78067672
Start: 3355569
End: 3356243
Strand: Direct
Name: 78067672
Synonym: Bcep18194_A6203
Alternate gene names: NA
Gene position: 3355569-3356243 (Clockwise)
Preceding gene: 78067671
Following gene: 78067673
Centisome position: 90.84
GC content: 55.41
Gene sequence:
>675_bases ATGTCGAACGAAATTCCACCAGAGACCGAAGAGGCATTGGACAGTAGAGAACCGGCCCACGCCGGCGCTCCGCCAATTGA CAGCGCTTCGGGCGACGAGCCAGACACGCCCCCGGTCGACGTCGACGCCGACAGGGAGTGGAATTGGCCGCGTCGAGCAA AGGTGCAGGCTTGGCCGGACCTAATCCAGTGGGCGGCCGTGTCATTTTTTGTTTCAGTCGCCATAGTATGGGTGGCAGCA GGGATTTCCAGTTCGCTCACCTTGCAGCCCGATCAGTACGGAATCTTACTTGCCGTATTGTCTGCCATTACCGGACTTGT TGTCGGCGCGTTTGACGACAGACCGAAAAAAATCGAAGACATGGAGACTTACAATGACGAAGAGGCTAAAGCAATCGCGT TGACTGCAAAAGAGGACGGCAATTGGTGTGCCGCCGGAATGGCAGCCTTCGGTCTTCCTGCTCTCCTTGCTCGCATTTAT GCACCAGCTGGTGGAAGTCACTATTGGAACGCGATCGGAGTCACAATGGCTACCTTCGTTGTTTTTTTTGGCGCGACGAT TGCTGTCCGGACAACAAGGGCAGAGATCGCGCGTCAGAAAGCGAAGTTTGATGCTCACAATCTCGCGCTCCGGAAGCAGA ATCCGCCGGCAAACAGCGGCCTGAATAAAACATAG
Upstream 100 bases:
>100_bases CGTCAGGGTTAGGGATACGCTGCAATTATCATTGATTGCATCGACCCGACGAGAGATACCAAATACAAGTCACTTTCATT AACGATGACGGGGTAACAGG
Downstream 100 bases:
>100_bases TCTCGCCTGGCGGAAGCATTGTCCCATGGCAGTCGGCGAACGCGACGAACAGTTGGTGTTCAATGACGGGCCGGCGATCT GCACGACACGGTGGCCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSNEIPPETEEALDSREPAHAGAPPIDSASGDEPDTPPVDVDADREWNWPRRAKVQAWPDLIQWAAVSFFVSVAIVWVAA GISSSLTLQPDQYGILLAVLSAITGLVVGAFDDRPKKIEDMETYNDEEAKAIALTAKEDGNWCAAGMAAFGLPALLARIY APAGGSHYWNAIGVTMATFVVFFGATIAVRTTRAEIARQKAKFDAHNLALRKQNPPANSGLNKT
Sequences:
>Translated_224_residues MSNEIPPETEEALDSREPAHAGAPPIDSASGDEPDTPPVDVDADREWNWPRRAKVQAWPDLIQWAAVSFFVSVAIVWVAA GISSSLTLQPDQYGILLAVLSAITGLVVGAFDDRPKKIEDMETYNDEEAKAIALTAKEDGNWCAAGMAAFGLPALLARIY APAGGSHYWNAIGVTMATFVVFFGATIAVRTTRAEIARQKAKFDAHNLALRKQNPPANSGLNKT >Mature_223_residues SNEIPPETEEALDSREPAHAGAPPIDSASGDEPDTPPVDVDADREWNWPRRAKVQAWPDLIQWAAVSFFVSVAIVWVAAG ISSSLTLQPDQYGILLAVLSAITGLVVGAFDDRPKKIEDMETYNDEEAKAIALTAKEDGNWCAAGMAAFGLPALLARIYA PAGGSHYWNAIGVTMATFVVFFGATIAVRTTRAEIARQKAKFDAHNLALRKQNPPANSGLNKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24074; Mature: 23943
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEIPPETEEALDSREPAHAGAPPIDSASGDEPDTPPVDVDADREWNWPRRAKVQAWPD CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LIQWAAVSFFVSVAIVWVAAGISSSLTLQPDQYGILLAVLSAITGLVVGAFDDRPKKIED HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH METYNDEEAKAIALTAKEDGNWCAAGMAAFGLPALLARIYAPAGGSHYWNAIGVTMATFV HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VFFGATIAVRTTRAEIARQKAKFDAHNLALRKQNPPANSGLNKT HHHHHHHEEEHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCC >Mature Secondary Structure SNEIPPETEEALDSREPAHAGAPPIDSASGDEPDTPPVDVDADREWNWPRRAKVQAWPD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LIQWAAVSFFVSVAIVWVAAGISSSLTLQPDQYGILLAVLSAITGLVVGAFDDRPKKIED HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH METYNDEEAKAIALTAKEDGNWCAAGMAAFGLPALLARIYAPAGGSHYWNAIGVTMATFV HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VFFGATIAVRTTRAEIARQKAKFDAHNLALRKQNPPANSGLNKT HHHHHHHEEEHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA