| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067669
Identifier: 78067669
GI number: 78067669
Start: 3346767
End: 3347450
Strand: Direct
Name: 78067669
Synonym: Bcep18194_A6200
Alternate gene names: NA
Gene position: 3346767-3347450 (Clockwise)
Preceding gene: 78067668
Following gene: 78067670
Centisome position: 90.6
GC content: 53.22
Gene sequence:
>684_bases ATGGATAGCTTTGACCTGTCCGACCTCGATAACGTCTCGCTCGATGGTCTCGAATTTTGCCTACACGTATATCGCATATT CGAAGGTCTCAGACAGACTGAAGAGGGACGAGTTAAGCTCCGCATGCGCGCATCGGATGTCGAAAAGAAAATCCTGGAAG AACTACTGCCGATATGCAAGTTCGTGCAGGCTCGCTATCGTCCGGGACGATACATTTCGGTACGGTGGATAGACGGAAAT CAGGCCTTCGATGCCGAGCTGGAGCAGCACGGAGACTATGTATCCAAAGGGCACCACCCGTCTCGAGTGTACCTAGAAGT AACCTGCGCCGTGCACAGCAACGACCATCTATGCAGAGAGCTAATCACGAAGAGTGGAGCTTGCTTCAGCCCCGACGGCG TAAAGCGCCGCAAGTCCGGCGAGATTGCCTCAGACCCAGTCGTCTACGCCGGCGTCGAGTACGCGCAGAGCTTCAGCAAT ATTGTTCTTGATCGGATATCGAAGAAGATCAAAAAAAACTACCCGCCTGGAACAATCCTGGTAATCCCGTGCACGCCCGG CAACCTCTGCTTCCAAGATGATTGGGACGCGCTTGTCAGCAGCGTCAAATGCCGACTCCCGACTCATTCGTTCGGCGAGA TATTTATCTATGACACCACTCTCGAGCACATGACGTCGCTATGA
Upstream 100 bases:
>100_bases TAAAGTTTTCGACGTAATACATGCAGACACATCGATACATAGCTGGAAGTGATTACTCGACGGCTATTCGGCATCTCTGG CCGACCAGCACAGGAGAAAA
Downstream 100 bases:
>100_bases CTCGTCACACCCATGTGTCGTGCTGCCTCAAATCAACAATGCCTACCCTACACAAATACGCTTGACTAACCAGTATCAGC ATTCTAGATTGATCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDSFDLSDLDNVSLDGLEFCLHVYRIFEGLRQTEEGRVKLRMRASDVEKKILEELLPICKFVQARYRPGRYISVRWIDGN QAFDAELEQHGDYVSKGHHPSRVYLEVTCAVHSNDHLCRELITKSGACFSPDGVKRRKSGEIASDPVVYAGVEYAQSFSN IVLDRISKKIKKNYPPGTILVIPCTPGNLCFQDDWDALVSSVKCRLPTHSFGEIFIYDTTLEHMTSL
Sequences:
>Translated_227_residues MDSFDLSDLDNVSLDGLEFCLHVYRIFEGLRQTEEGRVKLRMRASDVEKKILEELLPICKFVQARYRPGRYISVRWIDGN QAFDAELEQHGDYVSKGHHPSRVYLEVTCAVHSNDHLCRELITKSGACFSPDGVKRRKSGEIASDPVVYAGVEYAQSFSN IVLDRISKKIKKNYPPGTILVIPCTPGNLCFQDDWDALVSSVKCRLPTHSFGEIFIYDTTLEHMTSL >Mature_227_residues MDSFDLSDLDNVSLDGLEFCLHVYRIFEGLRQTEEGRVKLRMRASDVEKKILEELLPICKFVQARYRPGRYISVRWIDGN QAFDAELEQHGDYVSKGHHPSRVYLEVTCAVHSNDHLCRELITKSGACFSPDGVKRRKSGEIASDPVVYAGVEYAQSFSN IVLDRISKKIKKNYPPGTILVIPCTPGNLCFQDDWDALVSSVKCRLPTHSFGEIFIYDTTLEHMTSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25793; Mature: 25793
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSFDLSDLDNVSLDGLEFCLHVYRIFEGLRQTEEGRVKLRMRASDVEKKILEELLPICK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH FVQARYRPGRYISVRWIDGNQAFDAELEQHGDYVSKGHHPSRVYLEVTCAVHSNDHLCRE HHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHCCCCCCEEEEEEEEEECCCHHHHHH LITKSGACFSPDGVKRRKSGEIASDPVVYAGVEYAQSFSNIVLDRISKKIKKNYPPGTIL HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VIPCTPGNLCFQDDWDALVSSVKCRLPTHSFGEIFIYDTTLEHMTSL EEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCC >Mature Secondary Structure MDSFDLSDLDNVSLDGLEFCLHVYRIFEGLRQTEEGRVKLRMRASDVEKKILEELLPICK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH FVQARYRPGRYISVRWIDGNQAFDAELEQHGDYVSKGHHPSRVYLEVTCAVHSNDHLCRE HHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHCCCCCCEEEEEEEEEECCCHHHHHH LITKSGACFSPDGVKRRKSGEIASDPVVYAGVEYAQSFSNIVLDRISKKIKKNYPPGTIL HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VIPCTPGNLCFQDDWDALVSSVKCRLPTHSFGEIFIYDTTLEHMTSL EEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA