Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 78067654

GI number: 78067654

Start: 3331951

End: 3332373

Strand: Reverse

Name: yibN [H]

Synonym: Bcep18194_A6185

Alternate gene names: 78067654

Gene position: 3332373-3331951 (Counterclockwise)

Preceding gene: 78067658

Following gene: 78067653

Centisome position: 90.21

GC content: 69.5

Gene sequence:

>423_bases
GTGACGTTCTTTACCGATTACACCAACCTGGCCCTTATCGCGATCCTGGTGGTATCCGGCGGCCTGCTGGCCTGGCCCGC
GCTGCGCCGCGGCCGTGGCGGCCTGTCCGCCGCAGAGGCGACGCAACTCATCAACCGCCGCAACGCGGTCGTGATCGACG
TGCGCGCCGCGTCCGATTTCGCTGCCGGCCACCTGCCGTCGGCACGTCAGGTCGCGGCGGGCGAGATCGGCACGAAGATC
GCGCAAGTCGCGAAGAACAAGAGCACCCCGGTGCTGCTCGTCTGCCAGAACGGCCAGCAGTCGCAGAAGGCGGCGCGCGA
GGTCGAGGCGGCGGGTTACGCCGAGGTGCACGTGCTCGAGGGCGGCGTGGCCGCCTGGCAGCAGGCCGGGATGCCGGTCG
TCAAACAAGGAGTGGCGAAGTGA

Upstream 100 bases:

>100_bases
CGTCGAGCAGGACCCGACCCGGGCCCGCCATCGCGCAAGACGGTTATTTTATAATGGCGGGATTGTCCTCATCCGATTTC
TCTTTTTCCGGCGGAATTCC

Downstream 100 bases:

>100_bases
ACAAGGTTTTGATGTACAGCACGCAGGTGTGTCCGTATTGCATCCAGGCCGAGCGCCTGCTGAAGCTGCGCGGTGTCGAG
CAGATCGAGAAGGTGCTGAT

Product: rhodanese-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTFFTDYTNLALIAILVVSGGLLAWPALRRGRGGLSAAEATQLINRRNAVVIDVRAASDFAAGHLPSARQVAAGEIGTKI
AQVAKNKSTPVLLVCQNGQQSQKAAREVEAAGYAEVHVLEGGVAAWQQAGMPVVKQGVAK

Sequences:

>Translated_140_residues
MTFFTDYTNLALIAILVVSGGLLAWPALRRGRGGLSAAEATQLINRRNAVVIDVRAASDFAAGHLPSARQVAAGEIGTKI
AQVAKNKSTPVLLVCQNGQQSQKAAREVEAAGYAEVHVLEGGVAAWQQAGMPVVKQGVAK
>Mature_139_residues
TFFTDYTNLALIAILVVSGGLLAWPALRRGRGGLSAAEATQLINRRNAVVIDVRAASDFAAGHLPSARQVAAGEIGTKIA
QVAKNKSTPVLLVCQNGQQSQKAAREVEAAGYAEVHVLEGGVAAWQQAGMPVVKQGVAK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=125, Percent_Identity=34.4, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 14576; Mature: 14445

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFTDYTNLALIAILVVSGGLLAWPALRRGRGGLSAAEATQLINRRNAVVIDVRAASDF
CCEECCHHHHHHHHHHHHHCCHHCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
AAGHLPSARQVAAGEIGTKIAQVAKNKSTPVLLVCQNGQQSQKAAREVEAAGYAEVHVLE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
GGVAAWQQAGMPVVKQGVAK
CCHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure 
TFFTDYTNLALIAILVVSGGLLAWPALRRGRGGLSAAEATQLINRRNAVVIDVRAASDF
CEECCHHHHHHHHHHHHHCCHHCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
AAGHLPSARQVAAGEIGTKIAQVAKNKSTPVLLVCQNGQQSQKAAREVEAAGYAEVHVLE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
GGVAAWQQAGMPVVKQGVAK
CCHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]