Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78067634

Identifier: 78067634

GI number: 78067634

Start: 3315898

End: 3316188

Strand: Direct

Name: 78067634

Synonym: Bcep18194_A6165

Alternate gene names: NA

Gene position: 3315898-3316188 (Clockwise)

Preceding gene: 78067631

Following gene: 78067640

Centisome position: 89.76

GC content: 63.57

Gene sequence:

>291_bases
ATGTACATCATCGACATTCATTACACCGCATCGCTCGAGCGCATCGACGACGCGCTCGAACGCCATCGCGCATTTCTGCA
GCCGCAGTTCGACAAGGGCATCTTCATCGCAGCGGGGCCGAAGGTGCCGCGCGAAGGCGGCGTGATCCTCGCGGCCCGCA
TCGACCGCGACGAGCTGGACGCGATCCTGAAGACCGATCCGTTCGTCATCGAGGGGCTCGCCACGTATCGCGTGACGGAA
TTCCGGATCACGCGTGCCGCATCCGGCTTCAACGTACCCGCGCTGCCGTAA

Upstream 100 bases:

>100_bases
GCCCCGCACCGCGCCTGCCGGCGCGACAGCCCGCATCCGCTGTGCTAAAAAGACCGGCTAGCCGGCACACGAAGAGCCGG
CACCATTCCGGGGGCCACCC

Downstream 100 bases:

>100_bases
CGCGACGCCTGCGCGACATCTGCGCGACATCTGCGCGACATCTGCGCGAGGCGCGCGCAGGCCGACACGCCGCCTGACGG
GCGGCGCATGCCAACAACGA

Product: YCII-related protein

Products: NA

Alternate protein names: YCII-Related Protein; YCII-Related Domain-Containing Protein; YCII-Related Domain Superfamily Protein; Ycii-Related Protein; YCII-Related Domain Superfamily; YCII-Like Protein; GTP Cyclohydrolase II; YciI Domain-Containing Protein; Protein Conserved In Bacteria; YciL Domain-Containing Protein; YCII-Related Domain Family Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MYIIDIHYTASLERIDDALERHRAFLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILKTDPFVIEGLATYRVTE
FRITRAASGFNVPALP

Sequences:

>Translated_96_residues
MYIIDIHYTASLERIDDALERHRAFLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILKTDPFVIEGLATYRVTE
FRITRAASGFNVPALP
>Mature_96_residues
MYIIDIHYTASLERIDDALERHRAFLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILKTDPFVIEGLATYRVTE
FRITRAASGFNVPALP

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10756; Mature: 10756

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIIDIHYTASLERIDDALERHRAFLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH
AILKTDPFVIEGLATYRVTEFRITRAASGFNVPALP
HHHCCCCEEEECHHHEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MYIIDIHYTASLERIDDALERHRAFLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH
AILKTDPFVIEGLATYRVTEFRITRAASGFNVPALP
HHHCCCCEEEECHHHEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA